| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is dat [H]
Identifier: 182678500
GI number: 182678500
Start: 1726064
End: 1726924
Strand: Direct
Name: dat [H]
Synonym: Bind_1524
Alternate gene names: 182678500
Gene position: 1726064-1726924 (Clockwise)
Preceding gene: 182678499
Following gene: 182678501
Centisome position: 41.39
GC content: 60.16
Gene sequence:
>861_bases GTGAGTCGGATCTTCTACCTTAACGGCCGTTACCTGCCGCGCGAGGAGGCCCATGTCTCCGTCGAGGATCGTGGATATCT TTTTGGCGACGGTGTCTATGAAGTCCTCGAAATTCATCGAGGCGCCTTGATCGATGAGGACCGTCATTGGCAAAGGCTCG ATCGGTCCCTCTCCGAATTACGGATCAGCTGGCCGATAGGGCAGGCGGCCTTCGGACGGGTGCTGCGCGAGGTCAAGGCC AGGAACAAGGTCGAGAACGGATTTCTCTATATTCAGATCACTCGTGGTGCCGCCCCGCGCGAACATGTCTTTCCGGCGCA GAATGTCCGGCCGAGCCTGCTTGTCAGCGCGCGTCCCGTTGATCCCCGCAAAGGCGAGGCACAGGCCCAAAAGGGCATTG GTGTCATCAGCCTGCCGGATCTGCGTTGGAAGCGGGTCGACATCAAAACCATCAATCTCCTCCCCAATGTTCTGGCCAAA CAGGCCGCCAAGGAGGAGGGTGCCACCGAAGCGTGGCTTTTCGACGAGGAAGGCCTCGTGACGGAAGGCGCGGCCTCGAA TGCCTGGATCATCGACGAGAATCGGACGATCCACACGCATCCGGTCGACCATTCGATCCTGCGCGGTATCACCAGGACGA CTTTGATCGATATTATCGCAGCCAAAGGCTATGCCTTGAAGGAACGCCGCTTCAGCCTGGCGGAGGCGCGCGCCGCGCGC GAGGCCTTTATTACCGGAGCCTTGAGTCTTGTCATGCCGGTGGTGCGCATCGACGGCAAGCCCATAGGCGAGGGGGTGCC GGGGCCGATCGCGACGGAACTGCGCCGTATTTTTCATGATACGGCAAGCCGAACGCTCTGA
Upstream 100 bases:
>100_bases CATCAGATCTCACGAGCGAATGCATCCGTGAGATACAACGCTCAAGCGCCGTACGGGCTGGAAAGCTTGGGAAAGAAACG GCGCCTGCCAGGGAGTTCGA
Downstream 100 bases:
>100_bases AATGATAAAAAGAAGCAAGGGATCGATGCGTTAGGAAGAAACTAGCGCTTGCGACTTTGGCTTTCGGCCGTTCTAATGGC GCCGTTTATTTTGCCCAAGG
Product: class IV aminotransferase
Products: NA
Alternate protein names: D-amino acid aminotransferase; D-amino acid transaminase; DAAT; D-aspartate aminotransferase [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSRIFYLNGRYLPREEAHVSVEDRGYLFGDGVYEVLEIHRGALIDEDRHWQRLDRSLSELRISWPIGQAAFGRVLREVKA RNKVENGFLYIQITRGAAPREHVFPAQNVRPSLLVSARPVDPRKGEAQAQKGIGVISLPDLRWKRVDIKTINLLPNVLAK QAAKEEGATEAWLFDEEGLVTEGAASNAWIIDENRTIHTHPVDHSILRGITRTTLIDIIAAKGYALKERRFSLAEARAAR EAFITGALSLVMPVVRIDGKPIGEGVPGPIATELRRIFHDTASRTL
Sequences:
>Translated_286_residues MSRIFYLNGRYLPREEAHVSVEDRGYLFGDGVYEVLEIHRGALIDEDRHWQRLDRSLSELRISWPIGQAAFGRVLREVKA RNKVENGFLYIQITRGAAPREHVFPAQNVRPSLLVSARPVDPRKGEAQAQKGIGVISLPDLRWKRVDIKTINLLPNVLAK QAAKEEGATEAWLFDEEGLVTEGAASNAWIIDENRTIHTHPVDHSILRGITRTTLIDIIAAKGYALKERRFSLAEARAAR EAFITGALSLVMPVVRIDGKPIGEGVPGPIATELRRIFHDTASRTL >Mature_285_residues SRIFYLNGRYLPREEAHVSVEDRGYLFGDGVYEVLEIHRGALIDEDRHWQRLDRSLSELRISWPIGQAAFGRVLREVKAR NKVENGFLYIQITRGAAPREHVFPAQNVRPSLLVSARPVDPRKGEAQAQKGIGVISLPDLRWKRVDIKTINLLPNVLAKQ AAKEEGATEAWLFDEEGLVTEGAASNAWIIDENRTIHTHPVDHSILRGITRTTLIDIIAAKGYALKERRFSLAEARAARE AFITGALSLVMPVVRIDGKPIGEGVPGPIATELRRIFHDTASRTL
Specific function: Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787338, Length=260, Percent_Identity=29.6153846153846, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI48994963, Length=287, Percent_Identity=25.7839721254355, Blast_Score=84, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005784 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.21 [H]
Molecular weight: Translated: 32046; Mature: 31915
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIFYLNGRYLPREEAHVSVEDRGYLFGDGVYEVLEIHRGALIDEDRHWQRLDRSLSEL CCEEEEECCCCCCCCCCEEEECCCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHE RISWPIGQAAFGRVLREVKARNKVENGFLYIQITRGAAPREHVFPAQNVRPSLLVSARPV EEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCCCCCCCCEEEEECCCC DPRKGEAQAQKGIGVISLPDLRWKRVDIKTINLLPNVLAKQAAKEEGATEAWLFDEEGLV CCCCCCHHHHHCCCEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCE TEGAASNAWIIDENRTIHTHPVDHSILRGITRTTLIDIIAAKGYALKERRFSLAEARAAR ECCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EAFITGALSLVMPVVRIDGKPIGEGVPGPIATELRRIFHDTASRTL HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRIFYLNGRYLPREEAHVSVEDRGYLFGDGVYEVLEIHRGALIDEDRHWQRLDRSLSEL CEEEEECCCCCCCCCCEEEECCCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHE RISWPIGQAAFGRVLREVKARNKVENGFLYIQITRGAAPREHVFPAQNVRPSLLVSARPV EEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCCCCCCCCCEEEEECCCC DPRKGEAQAQKGIGVISLPDLRWKRVDIKTINLLPNVLAKQAAKEEGATEAWLFDEEGLV CCCCCCHHHHHCCCEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCE TEGAASNAWIIDENRTIHTHPVDHSILRGITRTTLIDIIAAKGYALKERRFSLAEARAAR ECCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EAFITGALSLVMPVVRIDGKPIGEGVPGPIATELRRIFHDTASRTL HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9003455 [H]