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The map label for this gene is phoD [H]

Identifier: 182678479

GI number: 182678479

Start: 1702605

End: 1704173

Strand: Direct

Name: phoD [H]

Synonym: Bind_1503

Alternate gene names: 182678479

Gene position: 1702605-1704173 (Clockwise)

Preceding gene: 182678477

Following gene: 182678480

Centisome position: 40.83

GC content: 59.27

Gene sequence:

>1569_bases
ATGCGACTTCTTCCGACACGCCGTGCTTTTCTGGGCGGCGCCGGTGTCATGCTTCTTGCGCCAGGGAGAATTGTTGCCCC
GGCTTTGTCGCGCGCGGCGGATCGGCCGAAAATAACCCATGGTTCGCAGTCGGGCGATGTCACGACCGAGTCAGGTGTGG
TCTGGGCGAGAGCTGATCGGCCTTCGCAAATGCTGGTCGAGATCGCGACGCGGGAAAGTTTCAAGGACGCTCGCGCTTTG
CCGCCGGTGGATGCGCTGCCGGAAACGGATTACGCGGCCAAGCTTCTTGTCGAGGATCTGCCGGCCGACCAGACGATTTT
CTATCGCGTGCGTTTCCGCGATCTCGCCGAGATCAATGTTGAAAGCGAGCCTCTGATCGGGCGTTTTCGCACGGCGCCCA
CCGCGCGGCGCACAATCAGTTTCGTCTGGGGCGGCGATGTGGCGGGGCAGGGCTATGGCATCAATCTCGCCGATGGCGGC
ATGAAGACTTATGCATCCATGCGCGAAACACAGCCGGATTTCTTCATCCATTCCGGCGATACGATCTATGCCGATGGAGT
GATGCAGCCGGAGACGCGCCTGCCTGATGGCAGTTTGTGGAAGAATGATCTTCTGGTCGAGGCGAAAACCCGCGTGGCCG
AAACGCTCGACGATTTCCGGGCCAATCATCTCTACAATATGCAGGATGAGAACGTCCGTGCCTTCGCGGCTGAAGTGCCG
ATCTTCGTCCAATGGGACGATCACGAAGTCACCAATAATTGGTCTCTTTCGAAGCAACTGGGTCCGGCTTATCAGGAAAA
GTCGATCAGCCTGCTAGCCGCGCGCTCGCGGCGCGCCTTCCATGAGCTTTATCCCTTGCGGGAAAGTGCCGTGGAGCTTG
GTCGCGTCTATCGCAAGATCGCTTATGGCCCTCTGCTCGATGTGTTCATGCTGGATGAGCGGTCCTATCGCGGACCGAAT
GGCGCAAACCGCCAAAAAACCTATGGACCGGAAGCCTATTTTCTCGGTCCGGAACAGCTTGCCTGGCTGAAACGTGAGCT
TCTGGCCTCGCGAGCGGTCTGGAAAGTCATCGCCTCCGACATGCCGCTCAGCCTCATTGTCTATGATGATGCGGCCGCAC
GGCGTGGATCGGAAGCTTTTGCCCAGGGCGATGGGCCGCCGCTCGGCCGTGAGCTCGAAATCGCCGATCTTCTGCGCTTC
ATCAAGGCGGCGCCGATCCGAAATACGGTCTGGCTCACCGCCGATGTGCATTATACGGCGGCGCATCATTACGATCCCTC
ACGCGCCCAATTTCAGGATTTCGATCCTTTCTGGGAATTCGTCTCGGGGCCGATTCATGCCGGGACTTTCGGACCGAATG
AGCTCGACAACACTTTTGGGCCGGAAGTGCGTTTCATGAAGGCGCCGCCGCAAGGGCAGAGCAATCTCGCGCCTTCTGCC
GGCTACCAATTCTTCGGCCATGTGACGGTGGACGGCGTGACGGGTCAGATGACGGTCAGGTTGAAGGATCGCGCCAACAC
GGATCTTTGGAGCGTGACGCTTGATCCGGCTGAATCGGAAGCGGGCTGA

Upstream 100 bases:

>100_bases
GGTTTCGCAGCTCTGTTCAAAGGGCGATCCAGCGAATTCATTTTCATGACGTGTTGCGATGCAAGGATGCTTGCTCCCTT
TCGATGCGGAGCTTGATGCC

Downstream 100 bases:

>100_bases
ACGGAAGAGAATGTTGAAAAGCGATATTTTCTCCAAACGCTTAACCCATCTCTAACCATGCCGGGTGGATGCTGTCTTTA
TGGTCATCCGCAAGCGCATG

Product: putative alkaline phosphatase (PhoD); putative signal peptide

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MRLLPTRRAFLGGAGVMLLAPGRIVAPALSRAADRPKITHGSQSGDVTTESGVVWARADRPSQMLVEIATRESFKDARAL
PPVDALPETDYAAKLLVEDLPADQTIFYRVRFRDLAEINVESEPLIGRFRTAPTARRTISFVWGGDVAGQGYGINLADGG
MKTYASMRETQPDFFIHSGDTIYADGVMQPETRLPDGSLWKNDLLVEAKTRVAETLDDFRANHLYNMQDENVRAFAAEVP
IFVQWDDHEVTNNWSLSKQLGPAYQEKSISLLAARSRRAFHELYPLRESAVELGRVYRKIAYGPLLDVFMLDERSYRGPN
GANRQKTYGPEAYFLGPEQLAWLKRELLASRAVWKVIASDMPLSLIVYDDAAARRGSEAFAQGDGPPLGRELEIADLLRF
IKAAPIRNTVWLTADVHYTAAHHYDPSRAQFQDFDPFWEFVSGPIHAGTFGPNELDNTFGPEVRFMKAPPQGQSNLAPSA
GYQFFGHVTVDGVTGQMTVRLKDRANTDLWSVTLDPAESEAG

Sequences:

>Translated_522_residues
MRLLPTRRAFLGGAGVMLLAPGRIVAPALSRAADRPKITHGSQSGDVTTESGVVWARADRPSQMLVEIATRESFKDARAL
PPVDALPETDYAAKLLVEDLPADQTIFYRVRFRDLAEINVESEPLIGRFRTAPTARRTISFVWGGDVAGQGYGINLADGG
MKTYASMRETQPDFFIHSGDTIYADGVMQPETRLPDGSLWKNDLLVEAKTRVAETLDDFRANHLYNMQDENVRAFAAEVP
IFVQWDDHEVTNNWSLSKQLGPAYQEKSISLLAARSRRAFHELYPLRESAVELGRVYRKIAYGPLLDVFMLDERSYRGPN
GANRQKTYGPEAYFLGPEQLAWLKRELLASRAVWKVIASDMPLSLIVYDDAAARRGSEAFAQGDGPPLGRELEIADLLRF
IKAAPIRNTVWLTADVHYTAAHHYDPSRAQFQDFDPFWEFVSGPIHAGTFGPNELDNTFGPEVRFMKAPPQGQSNLAPSA
GYQFFGHVTVDGVTGQMTVRLKDRANTDLWSVTLDPAESEAG
>Mature_522_residues
MRLLPTRRAFLGGAGVMLLAPGRIVAPALSRAADRPKITHGSQSGDVTTESGVVWARADRPSQMLVEIATRESFKDARAL
PPVDALPETDYAAKLLVEDLPADQTIFYRVRFRDLAEINVESEPLIGRFRTAPTARRTISFVWGGDVAGQGYGINLADGG
MKTYASMRETQPDFFIHSGDTIYADGVMQPETRLPDGSLWKNDLLVEAKTRVAETLDDFRANHLYNMQDENVRAFAAEVP
IFVQWDDHEVTNNWSLSKQLGPAYQEKSISLLAARSRRAFHELYPLRESAVELGRVYRKIAYGPLLDVFMLDERSYRGPN
GANRQKTYGPEAYFLGPEQLAWLKRELLASRAVWKVIASDMPLSLIVYDDAAARRGSEAFAQGDGPPLGRELEIADLLRF
IKAAPIRNTVWLTADVHYTAAHHYDPSRAQFQDFDPFWEFVSGPIHAGTFGPNELDNTFGPEVRFMKAPPQGQSNLAPSA
GYQFFGHVTVDGVTGQMTVRLKDRANTDLWSVTLDPAESEAG

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 58051; Mature: 58051

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLPTRRAFLGGAGVMLLAPGRIVAPALSRAADRPKITHGSQSGDVTTESGVVWARADR
CCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEECCC
PSQMLVEIATRESFKDARALPPVDALPETDYAAKLLVEDLPADQTIFYRVRFRDLAEINV
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECHHHCCCC
ESEPLIGRFRTAPTARRTISFVWGGDVAGQGYGINLADGGMKTYASMRETQPDFFIHSGD
CCCCCCHHHCCCCCHHHEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCC
TIYADGVMQPETRLPDGSLWKNDLLVEAKTRVAETLDDFRANHLYNMQDENVRAFAAEVP
EEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
IFVQWDDHEVTNNWSLSKQLGPAYQEKSISLLAARSRRAFHELYPLRESAVELGRVYRKI
EEEEECCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYGPLLDVFMLDERSYRGPNGANRQKTYGPEAYFLGPEQLAWLKRELLASRAVWKVIASD
HHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCC
MPLSLIVYDDAAARRGSEAFAQGDGPPLGRELEIADLLRFIKAAPIRNTVWLTADVHYTA
CCEEEEEECCHHHCCCCHHHHCCCCCCCCCEECHHHHHHHHHCCCCCCEEEEEEEEEEEE
AHHYDPSRAQFQDFDPFWEFVSGPIHAGTFGPNELDNTFGPEVRFMKAPPQGQSNLAPSA
ECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
GYQFFGHVTVDGVTGQMTVRLKDRANTDLWSVTLDPAESEAG
CCEEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MRLLPTRRAFLGGAGVMLLAPGRIVAPALSRAADRPKITHGSQSGDVTTESGVVWARADR
CCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEECCC
PSQMLVEIATRESFKDARALPPVDALPETDYAAKLLVEDLPADQTIFYRVRFRDLAEINV
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECHHHCCCC
ESEPLIGRFRTAPTARRTISFVWGGDVAGQGYGINLADGGMKTYASMRETQPDFFIHSGD
CCCCCCHHHCCCCCHHHEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCC
TIYADGVMQPETRLPDGSLWKNDLLVEAKTRVAETLDDFRANHLYNMQDENVRAFAAEVP
EEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
IFVQWDDHEVTNNWSLSKQLGPAYQEKSISLLAARSRRAFHELYPLRESAVELGRVYRKI
EEEEECCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYGPLLDVFMLDERSYRGPNGANRQKTYGPEAYFLGPEQLAWLKRELLASRAVWKVIASD
HHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCC
MPLSLIVYDDAAARRGSEAFAQGDGPPLGRELEIADLLRFIKAAPIRNTVWLTADVHYTA
CCEEEEEECCHHHCCCCHHHHCCCCCCCCCEECHHHHHHHHHCCCCCCEEEEEEEEEEEE
AHHYDPSRAQFQDFDPFWEFVSGPIHAGTFGPNELDNTFGPEVRFMKAPPQGQSNLAPSA
ECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
GYQFFGHVTVDGVTGQMTVRLKDRANTDLWSVTLDPAESEAG
CCEEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]