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The map label for this gene is 182678473

Identifier: 182678473

GI number: 182678473

Start: 1697094

End: 1697417

Strand: Direct

Name: 182678473

Synonym: Bind_1497

Alternate gene names: NA

Gene position: 1697094-1697417 (Clockwise)

Preceding gene: 182678472

Following gene: 182678474

Centisome position: 40.7

GC content: 56.48

Gene sequence:

>324_bases
ATGGCGACAAAACATAGGTTCAAGAGCGATATTTCTGAGGCGATCCACTCGTCTGCGTCCATGCTCCACAAGGTCGGTGC
GCTCGATAAGGCGACGATGCGCGATTTCGACGCGCGCCACCTGGTCATTCCGGCCGAGATCGAGCCCGCGCAGATCAAGC
AGCTCCGCGAGGCCAACAATGTCAGTCAGCCAGTGTTCGCCCGCTATCTCAATACAAGCGAAAGCACGGTCGAGAAATGG
GAGACCGGCGCAAAGCGTCCGAGCGGCATGGCGCTTAAGCTGCTTACCGTTGTTCAGAAGTACGGACTACAAATTCTGTC
GTAA

Upstream 100 bases:

>100_bases
GAGCTAGAGGACTTCCGCACCCTCGCAAAGAGCTATGCGACGCTGACAGAGAAGCAGATCGCGCAGCTCCTGGAGGACAA
AGACCTGACGGAGATTTGCC

Downstream 100 bases:

>100_bases
GCCTGCGCTGTTTGCACATTGATACCCATTGGACCAGTTCATGAGTCCATTGTTACGACAGACTCAAACAGCCTCATTGA
TCCTCAAGCTCAGTGCCTCG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Cro/CI Family Transcriptional Regulator-Related Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator-Like Protein; Transcriptional Regulator-Like; Helix-Turn-Helix Family Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulatory Protein

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MATKHRFKSDISEAIHSSASMLHKVGALDKATMRDFDARHLVIPAEIEPAQIKQLREANNVSQPVFARYLNTSESTVEKW
ETGAKRPSGMALKLLTVVQKYGLQILS

Sequences:

>Translated_107_residues
MATKHRFKSDISEAIHSSASMLHKVGALDKATMRDFDARHLVIPAEIEPAQIKQLREANNVSQPVFARYLNTSESTVEKW
ETGAKRPSGMALKLLTVVQKYGLQILS
>Mature_106_residues
ATKHRFKSDISEAIHSSASMLHKVGALDKATMRDFDARHLVIPAEIEPAQIKQLREANNVSQPVFARYLNTSESTVEKWE
TGAKRPSGMALKLLTVVQKYGLQILS

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11935; Mature: 11804

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKHRFKSDISEAIHSSASMLHKVGALDKATMRDFDARHLVIPAEIEPAQIKQLREANN
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHCC
VSQPVFARYLNTSESTVEKWETGAKRPSGMALKLLTVVQKYGLQILS
CCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATKHRFKSDISEAIHSSASMLHKVGALDKATMRDFDARHLVIPAEIEPAQIKQLREANN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHCC
VSQPVFARYLNTSESTVEKWETGAKRPSGMALKLLTVVQKYGLQILS
CCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA