| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678285
Identifier: 182678285
GI number: 182678285
Start: 1508191
End: 1508880
Strand: Direct
Name: 182678285
Synonym: Bind_1301
Alternate gene names: NA
Gene position: 1508191-1508880 (Clockwise)
Preceding gene: 182678284
Following gene: 182678289
Centisome position: 36.17
GC content: 52.75
Gene sequence:
>690_bases ATGACAGAAGAAGCGATCAAGGACCTTGTGAAGGAAGCCCCCATTGTCGACGAGCCGAGGCCGCCTTGCGACCCCTATCC TTTGAGCCCCTATGTCGCCTGGGCGGGGCGGCGCAATCGCGATCCCATTCTTGGTGTCTTTAAAACTCTCTTCCCCAAGG ATGGCTCGGTGCTGGAACTCGCCAGCGGCAGCGGTGCCCATGTCAATTACTTCGCCCCGCATTTTCCGGAAGTCTCGTTC CATCCATCCGACTATGATACCAAGGTCTTCGAGACGATCAAACAAACACGGGATACACAGAATAACAAAAATGTCGATGA TCCGATTCTGATTGATCTGACGAAGCCGGATACATGGGTGAATGCGCAGGCGCGGCTCTATGATGCCATCTTCGTCATCA ATCTGTTTCAGGTGGCCCCGCTTTCGATAGCGGAGGGGATCGCCGAACTCGCGTCCAAAGTCTTGAAGCCGGGCGGCTTT CTGGCGATCTACGGGCCTTTCAAGGTCGATGGCCGTTATACGACTGCATCAAATCAGAATTTCGACGAGGAAATTCTCTC CAAAAACGTGCCGGAATGGGGCTTGAAGGATGTCCGCGATCTCGAAAAGATCGCTGCCGGACACAAGCTTGTTCTCAAGA AACAGCTCGATCTGCCGGCGAATAATTTCATTTTGTTATTTTCTCGTTGA
Upstream 100 bases:
>100_bases GGCCATCGTGCCGGGGATTTTTTGAAAACGCATCAAACCGATCCAAAAGTGGTGATGACTTTTGGTTTGATGCTCTAGCC CAGATTCTGGAGCCCATACC
Downstream 100 bases:
>100_bases TCGGGCTCCGAAGGTCCTACGTCAGGGGGCGCTGATAGCGACCCCTGAGCGAGTGACGCCACCGGCTCCCTTCCTAGAAT TTCTGCTTTTTCAAAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTEEAIKDLVKEAPIVDEPRPPCDPYPLSPYVAWAGRRNRDPILGVFKTLFPKDGSVLELASGSGAHVNYFAPHFPEVSF HPSDYDTKVFETIKQTRDTQNNKNVDDPILIDLTKPDTWVNAQARLYDAIFVINLFQVAPLSIAEGIAELASKVLKPGGF LAIYGPFKVDGRYTTASNQNFDEEILSKNVPEWGLKDVRDLEKIAAGHKLVLKKQLDLPANNFILLFSR
Sequences:
>Translated_229_residues MTEEAIKDLVKEAPIVDEPRPPCDPYPLSPYVAWAGRRNRDPILGVFKTLFPKDGSVLELASGSGAHVNYFAPHFPEVSF HPSDYDTKVFETIKQTRDTQNNKNVDDPILIDLTKPDTWVNAQARLYDAIFVINLFQVAPLSIAEGIAELASKVLKPGGF LAIYGPFKVDGRYTTASNQNFDEEILSKNVPEWGLKDVRDLEKIAAGHKLVLKKQLDLPANNFILLFSR >Mature_228_residues TEEAIKDLVKEAPIVDEPRPPCDPYPLSPYVAWAGRRNRDPILGVFKTLFPKDGSVLELASGSGAHVNYFAPHFPEVSFH PSDYDTKVFETIKQTRDTQNNKNVDDPILIDLTKPDTWVNAQARLYDAIFVINLFQVAPLSIAEGIAELASKVLKPGGFL AIYGPFKVDGRYTTASNQNFDEEILSKNVPEWGLKDVRDLEKIAAGHKLVLKKQLDLPANNFILLFSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=202, Percent_Identity=37.1287128712871, Blast_Score=140, Evalue=7e-34, Organism=Homo sapiens, GI93102391, Length=138, Percent_Identity=36.9565217391304, Blast_Score=90, Evalue=1e-18, Organism=Homo sapiens, GI93102401, Length=132, Percent_Identity=36.3636363636364, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71998087, Length=202, Percent_Identity=33.1683168316832, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI28574095, Length=173, Percent_Identity=33.5260115606936, Blast_Score=113, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25609; Mature: 25478
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEAIKDLVKEAPIVDEPRPPCDPYPLSPYVAWAGRRNRDPILGVFKTLFPKDGSVLEL CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCEEEE ASGSGAHVNYFAPHFPEVSFHPSDYDTKVFETIKQTRDTQNNKNVDDPILIDLTKPDTWV CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC NAQARLYDAIFVINLFQVAPLSIAEGIAELASKVLKPGGFLAIYGPFKVDGRYTTASNQN CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCEEEECCCCC FDEEILSKNVPEWGLKDVRDLEKIAAGHKLVLKKQLDLPANNFILLFSR HHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEC >Mature Secondary Structure TEEAIKDLVKEAPIVDEPRPPCDPYPLSPYVAWAGRRNRDPILGVFKTLFPKDGSVLEL CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCEEEE ASGSGAHVNYFAPHFPEVSFHPSDYDTKVFETIKQTRDTQNNKNVDDPILIDLTKPDTWV CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC NAQARLYDAIFVINLFQVAPLSIAEGIAELASKVLKPGGFLAIYGPFKVDGRYTTASNQN CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCEEEECCCCC FDEEILSKNVPEWGLKDVRDLEKIAAGHKLVLKKQLDLPANNFILLFSR HHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA