| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is asd [H]
Identifier: 182678171
GI number: 182678171
Start: 1376088
End: 1377122
Strand: Direct
Name: asd [H]
Synonym: Bind_1186
Alternate gene names: 182678171
Gene position: 1376088-1377122 (Clockwise)
Preceding gene: 182678168
Following gene: 182678173
Centisome position: 33.0
GC content: 55.75
Gene sequence:
>1035_bases ATGGGGTTCAAGGTTGCTGTCGTCGGCGCTACCGGTAATGTCGGGCGTGAAATGCTCGATATTCTCGCGGAGCGTCAGTT TCCGGCCGATGAAGTCGTTGCACTGGCTTCCTCTCGTTCGATGGGAACGGAAGTCTCGTTCGGCGACAAAACCCTGAAAT GTAAAACCCTGGACAATTACGATTTTACCGGCACGGATATTTGCCTGATGTCCGCCGGTGGCGCCGTTTCCAAGGAATGG TCGCCGAAAATTGGAGCCCAGGGGTGCATCGTCATCGATAATTCTTCCACCTGGCGCATGGACCCGGACGTTCCCTTGAT CGTGCCGGAGGTCAATGCCGATGCGATTGGCGGGTTCACGAAAAAGAACATCATCGCCAATCCCAATTGCTCGACGGCGC AATTGGTCGTTGCGCTGAAGCCCTTGCACGACAAGGCCAAAATCCTGCGCGTCGTCGTCTCGACCTATCAATCCGTCTCT GGCGGCGGCAAAGAGGCCATGGACGAGCTTTTTGCTCAGACACGGGCGATTTTTGTCTCGGATCCGGTGGAGAGCAAGAA ATTCCCCAAAAGAATCGCTTTCAATGTGATTCCGGAAATCGACGTCTTCATGGAGGACGGCTATACGAAGGAAGAATGGA AGATGGTGGTCGAGACGAAGAAAATTCTCGATCCGAAAATCAAGGTGACGGCCACTTGTGTCCGCGTGCCGGTGTTCATC GGCCATTCCGAGTCCGTGAATGTCGAATTCGAGCATCCGATCAGCGCCGACGAGGCCCGCGATATTTTGCGCGAGGCGCC GGGTTGTCTTGTCATCGATAAGAGGGAAAAAGGTGGCTACATAACGCCGCATGAGGCGGCGGGCGAGGATGCCACCTATA TTTCCCGCATCCGGGAAGATCCGACGGTCGAAAACGGGCTCGTCTTCTGGTGCGTTTCGGACAATCTGCGCAAGGGTGCC GCCTTGAATGCCGTGCAGATCGCCGAGGTCCTGATCAACCGCAAGCTGATCGAGCCGAAACGTAAGGCGGCGTGA
Upstream 100 bases:
>100_bases TCGCTTATGCCGTTGAAAAAGCGAAAATTGGAGAGCGGAACCGAGCGTCGCTGTTGCGACACTTAAATATTAGCGATCGC TTTGAGCGACGGAGAGAAGA
Downstream 100 bases:
>100_bases GGGAAAGAGACAGCGTAACGATTTCGCTGGCTTTCAGTAGATAAACCCAATCATCAAAGGCGCTCTTTCTTCGAGAAAGG GCGCCTCGCTTTTATCGATG
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MGFKVAVVGATGNVGREMLDILAERQFPADEVVALASSRSMGTEVSFGDKTLKCKTLDNYDFTGTDICLMSAGGAVSKEW SPKIGAQGCIVIDNSSTWRMDPDVPLIVPEVNADAIGGFTKKNIIANPNCSTAQLVVALKPLHDKAKILRVVVSTYQSVS GGGKEAMDELFAQTRAIFVSDPVESKKFPKRIAFNVIPEIDVFMEDGYTKEEWKMVVETKKILDPKIKVTATCVRVPVFI GHSESVNVEFEHPISADEARDILREAPGCLVIDKREKGGYITPHEAAGEDATYISRIREDPTVENGLVFWCVSDNLRKGA ALNAVQIAEVLINRKLIEPKRKAA
Sequences:
>Translated_344_residues MGFKVAVVGATGNVGREMLDILAERQFPADEVVALASSRSMGTEVSFGDKTLKCKTLDNYDFTGTDICLMSAGGAVSKEW SPKIGAQGCIVIDNSSTWRMDPDVPLIVPEVNADAIGGFTKKNIIANPNCSTAQLVVALKPLHDKAKILRVVVSTYQSVS GGGKEAMDELFAQTRAIFVSDPVESKKFPKRIAFNVIPEIDVFMEDGYTKEEWKMVVETKKILDPKIKVTATCVRVPVFI GHSESVNVEFEHPISADEARDILREAPGCLVIDKREKGGYITPHEAAGEDATYISRIREDPTVENGLVFWCVSDNLRKGA ALNAVQIAEVLINRKLIEPKRKAA >Mature_343_residues GFKVAVVGATGNVGREMLDILAERQFPADEVVALASSRSMGTEVSFGDKTLKCKTLDNYDFTGTDICLMSAGGAVSKEWS PKIGAQGCIVIDNSSTWRMDPDVPLIVPEVNADAIGGFTKKNIIANPNCSTAQLVVALKPLHDKAKILRVVVSTYQSVSG GGKEAMDELFAQTRAIFVSDPVESKKFPKRIAFNVIPEIDVFMEDGYTKEEWKMVVETKKILDPKIKVTATCVRVPVFIG HSESVNVEFEHPISADEARDILREAPGCLVIDKREKGGYITPHEAAGEDATYISRIREDPTVENGLVFWCVSDNLRKGAA LNAVQIAEVLINRKLIEPKRKAA
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=337, Percent_Identity=36.7952522255193, Blast_Score=226, Evalue=1e-60, Organism=Escherichia coli, GI1789841, Length=359, Percent_Identity=28.4122562674095, Blast_Score=101, Evalue=9e-23, Organism=Saccharomyces cerevisiae, GI6320362, Length=401, Percent_Identity=31.6708229426434, Blast_Score=98, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 37544; Mature: 37412
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFKVAVVGATGNVGREMLDILAERQFPADEVVALASSRSMGTEVSFGDKTLKCKTLDNY CCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCCEEEEEECCCC DFTGTDICLMSAGGAVSKEWSPKIGAQGCIVIDNSSTWRMDPDVPLIVPEVNADAIGGFT CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCEEEECCCCHHCCCCC KKNIIANPNCSTAQLVVALKPLHDKAKILRVVVSTYQSVSGGGKEAMDELFAQTRAIFVS CCCEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEE DPVESKKFPKRIAFNVIPEIDVFMEDGYTKEEWKMVVETKKILDPKIKVTATCVRVPVFI CCCCCHHCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEE GHSESVNVEFEHPISADEARDILREAPGCLVIDKREKGGYITPHEAAGEDATYISRIRED CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCC PTVENGLVFWCVSDNLRKGAALNAVQIAEVLINRKLIEPKRKAA CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure GFKVAVVGATGNVGREMLDILAERQFPADEVVALASSRSMGTEVSFGDKTLKCKTLDNY CEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCCCEEEEEECCCC DFTGTDICLMSAGGAVSKEWSPKIGAQGCIVIDNSSTWRMDPDVPLIVPEVNADAIGGFT CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCEEEECCCCHHCCCCC KKNIIANPNCSTAQLVVALKPLHDKAKILRVVVSTYQSVSGGGKEAMDELFAQTRAIFVS CCCEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEE DPVESKKFPKRIAFNVIPEIDVFMEDGYTKEEWKMVVETKKILDPKIKVTATCVRVPVFI CCCCCHHCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEE GHSESVNVEFEHPISADEARDILREAPGCLVIDKREKGGYITPHEAAGEDATYISRIRED CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCC PTVENGLVFWCVSDNLRKGAALNAVQIAEVLINRKLIEPKRKAA CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]