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The map label for this gene is hypC [H]

Identifier: 182678147

GI number: 182678147

Start: 1344185

End: 1344499

Strand: Direct

Name: hypC [H]

Synonym: Bind_1162

Alternate gene names: 182678147

Gene position: 1344185-1344499 (Clockwise)

Preceding gene: 182678146

Following gene: 182678148

Centisome position: 32.23

GC content: 55.87

Gene sequence:

>315_bases
ATGTGTTTGGGAATTCCGGGACGGATCTCTGCCATTCTTGACGAGGCGAACAGCCTGGTTGAGGTGGATGTTGCAGGTGT
CAAGCGGAGCGTTGATGCCGTCTGTGTTGCTGAGGTGGATGTGCCTTTGTCCGATCTCATTGGGACTTGGGTGCTGATCC
ATGTCGGTTTTGCCATGAGCCGGATCGACGAAGCGGAAGCTCTCGAAACGTTGCGCATACTTGCCGAGATCGGGGAACTG
GACGGCGAACTTGCGGCCATGCGGGATTCGCAAGAGGCGCGAAATTCACATGAGGCGATGGAGATACAAGGGTGA

Upstream 100 bases:

>100_bases
AGGAACTCGGCCTTTCCCGCGTTGGTTTGCGGGCCAAGCTCGAACGCTATGGCATAGCACCGGACGCAGGTCGCGAGACG
ATACAATAGAGGGCGGACCA

Downstream 100 bases:

>100_bases
GCGGCACAATGCGCTTCATCGATGAATTTCGCGACCCGGCCCTGGCCGAAAAGCTGTTTACTGAGATCGCGCAAACCGCC
AAGCGGATCGGAGCCGTGCG

Product: hydrogenase assembly chaperone hypC/hupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MCLGIPGRISAILDEANSLVEVDVAGVKRSVDAVCVAEVDVPLSDLIGTWVLIHVGFAMSRIDEAEALETLRILAEIGEL
DGELAAMRDSQEARNSHEAMEIQG

Sequences:

>Translated_104_residues
MCLGIPGRISAILDEANSLVEVDVAGVKRSVDAVCVAEVDVPLSDLIGTWVLIHVGFAMSRIDEAEALETLRILAEIGEL
DGELAAMRDSQEARNSHEAMEIQG
>Mature_104_residues
MCLGIPGRISAILDEANSLVEVDVAGVKRSVDAVCVAEVDVPLSDLIGTWVLIHVGFAMSRIDEAEALETLRILAEIGEL
DGELAAMRDSQEARNSHEAMEIQG

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

Organism=Escherichia coli, GI1789364, Length=77, Percent_Identity=46.7532467532467, Blast_Score=70, Evalue=2e-14,
Organism=Escherichia coli, GI1789083, Length=92, Percent_Identity=41.304347826087, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 11117; Mature: 11117

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLGIPGRISAILDEANSLVEVDVAGVKRSVDAVCVAEVDVPLSDLIGTWVLIHVGFAMS
CCCCCCHHHHHHHHHCCCEEEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
RIDEAEALETLRILAEIGELDGELAAMRDSQEARNSHEAMEIQG
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCCEEECC
>Mature Secondary Structure
MCLGIPGRISAILDEANSLVEVDVAGVKRSVDAVCVAEVDVPLSDLIGTWVLIHVGFAMS
CCCCCCHHHHHHHHHCCCEEEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
RIDEAEALETLRILAEIGELDGELAAMRDSQEARNSHEAMEIQG
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]