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The map label for this gene is hupF [H]

Identifier: 182678139

GI number: 182678139

Start: 1337888

End: 1338226

Strand: Direct

Name: hupF [H]

Synonym: Bind_1154

Alternate gene names: 182678139

Gene position: 1337888-1338226 (Clockwise)

Preceding gene: 182678138

Following gene: 182678140

Centisome position: 32.08

GC content: 66.67

Gene sequence:

>339_bases
ATGTGCATTGGCATTCCCATGCGGATCGTCAGCTTGGCGGGTGAAACCGCGCTCTGCGTCGCGGAAGGGCGGGAAGAGCA
AGTGGATCTCGCCTTGCTGTCCGAGGCGAAGGTCGGGGAGGACGTTCTGGTCTTTCTCGGTCTTGCCCGCCGTGTGCTCG
ACCCCGAAGAGGCGGCGCAGATCCGAGCGGCGCTCGGGGCCCTGGCGGCGCTTTCTCCCGCTTCTGGCGAGGCGACGGTG
GATCTCTTGCAGGATGGTTTCGCCGATCTCATGGACCGGGAGCCGCAATTGCCGCCCCATCTTGAGGCGGCCCGCGCCGC
CGGCCTGGAGGAAGGTTGA

Upstream 100 bases:

>100_bases
TGTGGCGCGGACGCCTTACGAAACGGAGCGGCCGGATGCCGAGATGGCGTGTCGCCACGGCGATGACAGGCTGCTCGCGC
GGTTGAAGGGCTGAGAGCGT

Downstream 100 bases:

>100_bases
TGTCGATTTTAGAGACTTATCCCCTGGTGCGCCGATTGGTGGAAGAGCATCGCATGCCCCTGGTGGAAACAGACTTGCCG
CCCGCTGGCTTGAGGCTCCT

Product: hydrogenase assembly chaperone hypC/hupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MCIGIPMRIVSLAGETALCVAEGREEQVDLALLSEAKVGEDVLVFLGLARRVLDPEEAAQIRAALGALAALSPASGEATV
DLLQDGFADLMDREPQLPPHLEAARAAGLEEG

Sequences:

>Translated_112_residues
MCIGIPMRIVSLAGETALCVAEGREEQVDLALLSEAKVGEDVLVFLGLARRVLDPEEAAQIRAALGALAALSPASGEATV
DLLQDGFADLMDREPQLPPHLEAARAAGLEEG
>Mature_112_residues
MCIGIPMRIVSLAGETALCVAEGREEQVDLALLSEAKVGEDVLVFLGLARRVLDPEEAAQIRAALGALAALSPASGEATV
DLLQDGFADLMDREPQLPPHLEAARAAGLEEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 11676; Mature: 11676

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIGIPMRIVSLAGETALCVAEGREEQVDLALLSEAKVGEDVLVFLGLARRVLDPEEAAQ
CCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHH
IRAALGALAALSPASGEATVDLLQDGFADLMDREPQLPPHLEAARAAGLEEG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MCIGIPMRIVSLAGETALCVAEGREEQVDLALLSEAKVGEDVLVFLGLARRVLDPEEAAQ
CCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHH
IRAALGALAALSPASGEATVDLLQDGFADLMDREPQLPPHLEAARAAGLEEG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]