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The map label for this gene is hupZ [H]

Identifier: 182678137

GI number: 182678137

Start: 1336239

End: 1337003

Strand: Direct

Name: hupZ [H]

Synonym: Bind_1152

Alternate gene names: 182678137

Gene position: 1336239-1337003 (Clockwise)

Preceding gene: 182678136

Following gene: 182678138

Centisome position: 32.04

GC content: 55.42

Gene sequence:

>765_bases
ATGGCTGCATTAAAACCGGCGCGCATTCTCCATGATGACGATCTCGCCGGCACCAATCTGGAAGGATTGAAGGCGGCGCC
TTTGCGGGCGCGGCGGCTCACGGCCGTCTATGTCTATGAAGCGCCTGTGCGGTTGTGGCATTGGATCAATGCCGCCTCGA
TCGTTGTCCTGGCGATTACCGGCTATCTGATCGGCTCGCCGCCTTCGACCTTGGCGGGGGAGGCCTCGGCCCATTTCCAG
ATGGGCTGGATCCGCTATCTGCATTTCGCGGCGGCCTGGATCTTTGCGGTTGGCTTTACCGGCCGGGTGATCTGGGCCTT
TTTCGGCAATGTCTATTCCCGCGAATTGTTCTACATCCCGTTCTGGAGCCTCGCTTATTGGCGTGAGCTCTTTGATGAGA
TGCTTGTCTATGCCTTCATCAAGAAACATGCGCGGAAAGTGGTCGGGCATAATGCGCTGGCGCGCTTCTCGCTGTTTTTC
TGTTTTACACTGGCGGGTCTGTTCATGCTCGCCACAGGCTTTGCGCTTTATTCCGACGGGACTGGGATTGATAGCTGGGA
AGGCCGGCTGTTTGGCTGGATCATGCCTTTGTTGGGCGGCAATCTCGCGACACATTTCTGGCATCACATCGGAATGTGGG
TGATCCTGCTCTTCATCATGTTTCACGTCTACACTGTCACACGGGAGGATATTACCTCCCGCCAGACTCTGATTTCCGCC
ATGATTAACGGATATCGTAGCTTTCGTGATGATGCTCGTGATTAA

Upstream 100 bases:

>100_bases
ACGCTGCATTCCTTTGACCCTTGCATGGCTTGTGCGACCCATGTGATGGCGCCGGACGGCGAAGAACTCGCCCGTGTCAC
AATCCGCTGAGGAAATCACG

Downstream 100 bases:

>100_bases
CGGAGCCTCACTGGAAAGAAGCTTTCCAATTTTTTCGCACCCTGTATAGTTTTATTTCAAATTTTGCGCGCTCCAGCCTT
TTGCCTGGGGCGCGTTTTGC

Product: Ni/Fe-hydrogenase, b-type cytochrome subunit

Products: oxidized ferredoxin; H2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MAALKPARILHDDDLAGTNLEGLKAAPLRARRLTAVYVYEAPVRLWHWINAASIVVLAITGYLIGSPPSTLAGEASAHFQ
MGWIRYLHFAAAWIFAVGFTGRVIWAFFGNVYSRELFYIPFWSLAYWRELFDEMLVYAFIKKHARKVVGHNALARFSLFF
CFTLAGLFMLATGFALYSDGTGIDSWEGRLFGWIMPLLGGNLATHFWHHIGMWVILLFIMFHVYTVTREDITSRQTLISA
MINGYRSFRDDARD

Sequences:

>Translated_254_residues
MAALKPARILHDDDLAGTNLEGLKAAPLRARRLTAVYVYEAPVRLWHWINAASIVVLAITGYLIGSPPSTLAGEASAHFQ
MGWIRYLHFAAAWIFAVGFTGRVIWAFFGNVYSRELFYIPFWSLAYWRELFDEMLVYAFIKKHARKVVGHNALARFSLFF
CFTLAGLFMLATGFALYSDGTGIDSWEGRLFGWIMPLLGGNLATHFWHHIGMWVILLFIMFHVYTVTREDITSRQTLISA
MINGYRSFRDDARD
>Mature_253_residues
AALKPARILHDDDLAGTNLEGLKAAPLRARRLTAVYVYEAPVRLWHWINAASIVVLAITGYLIGSPPSTLAGEASAHFQM
GWIRYLHFAAAWIFAVGFTGRVIWAFFGNVYSRELFYIPFWSLAYWRELFDEMLVYAFIKKHARKVVGHNALARFSLFFC
FTLAGLFMLATGFALYSDGTGIDSWEGRLFGWIMPLLGGNLATHFWHHIGMWVILLFIMFHVYTVTREDITSRQTLISAM
INGYRSFRDDARD

Specific function: Probable b-type cytochrome [H]

COG id: COG1969

COG function: function code C; Ni,Fe-hydrogenase I cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupC/hyaC/hydC family [H]

Homologues:

Organism=Escherichia coli, GI1787208, Length=227, Percent_Identity=42.2907488986784, Blast_Score=179, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174
- InterPro:   IPR000516 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 28987; Mature: 28856

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALKPARILHDDDLAGTNLEGLKAAPLRARRLTAVYVYEAPVRLWHWINAASIVVLAIT
CCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHH
GYLIGSPPSTLAGEASAHFQMGWIRYLHFAAAWIFAVGFTGRVIWAFFGNVYSRELFYIP
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEC
FWSLAYWRELFDEMLVYAFIKKHARKVVGHNALARFSLFFCFTLAGLFMLATGFALYSDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TGIDSWEGRLFGWIMPLLGGNLATHFWHHIGMWVILLFIMFHVYTVTREDITSRQTLISA
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MINGYRSFRDDARD
HHHHHHHHHCCCCC
>Mature Secondary Structure 
AALKPARILHDDDLAGTNLEGLKAAPLRARRLTAVYVYEAPVRLWHWINAASIVVLAIT
CCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHH
GYLIGSPPSTLAGEASAHFQMGWIRYLHFAAAWIFAVGFTGRVIWAFFGNVYSRELFYIP
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEC
FWSLAYWRELFDEMLVYAFIKKHARKVVGHNALARFSLFFCFTLAGLFMLATGFALYSDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TGIDSWEGRLFGWIMPLLGGNLATHFWHHIGMWVILLFIMFHVYTVTREDITSRQTLISA
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MINGYRSFRDDARD
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced ferredoxin; 2 H+ [C]

Specific reaction: Reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7966281 [H]