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The map label for this gene is 182677990

Identifier: 182677990

GI number: 182677990

Start: 1150045

End: 1150932

Strand: Direct

Name: 182677990

Synonym: Bind_1004

Alternate gene names: NA

Gene position: 1150045-1150932 (Clockwise)

Preceding gene: 182677989

Following gene: 182677991

Centisome position: 27.58

GC content: 59.23

Gene sequence:

>888_bases
ATGCATGCACGCACGGAAGATTACACATATTGTGAAGACATGGTCCGGCGCGATGATCCCGATCGCTGGCTGGCCTCTCT
GTTCATTGAACAGCCCTTCCGCAAACATGCCTATGCGCTTTATGCTTTCAATCTGGAAATTGCCCGCGCGCGCGAGGTCG
TGACTGAGCCCATTTTGGGCGAAATCCGTTTTCAATGGTGGCGCGATATTCTGGAGCCGCCAGAAGGAGAAGACAACAAG
ATCGAGAGCGAGACCCAAGGTCATGTAATGGCCAATCCGGTGGCCGCCGCCGTGCTCGATACGATCGAGCGTTTCGCGCT
ACCGCGTGAAAGATTCATCGGCATGATCGAGGCGCGGACCTTCGATCTCTATGACGCGCCGATGCGCACTTTGGCCGAAC
TCGAATCCTATGGCCTTTCGACGGCTGGGAGCCTGTTCTATCTCGTGGCCTCTGTCCTCTCCGGCCCGGAAACACCCGGT
CTTCTTGCCGCTGCCGAACCGGCCGGGCTCGCCTATGGACTGACAGGCCTCATGCGCGCTTTGCCGTGGCATAGCGCGCG
CGGCCAGGATTATGTGCCCTGCGAAATGCTGAGCAGGCATAAAGCCGATCTCGAAGAAATCATCGGCGGCATAGCCTCGC
CGGGCGTCTTTGCGACGCTCGCCGAAATGCGCGGGCTCGCCCGCCAGCAGATTAGCTTGTTCGAACAAAGGATCGCGGCG
GTTCCGCTCAAAGCACGCGCGGCCTTCCTGCCCGTGTGCTTTACCAGCCCCTATCTGAAACAAATGGATAAGCGCGGCTA
TGCGCCTTTCCGGGTGCCGATCATGCTACCGCAATGGCGCAAGCAATGGATTCTGTGGCGGGCCTCGAAACGGTTGCGGG
GGGTGTGA

Upstream 100 bases:

>100_bases
TCAGGCCCGAACCCATGCCGACGGGCGCCGCGGCGCGGACCTATCCGATCCTGCTCGGAGAAAGGCGCCTCGTCGCGGCG
GCGCTGCTGGCGGTGCCCTA

Downstream 100 bases:

>100_bases
CACAGGCGGACGGTAACCCGTTCAAAGGTGTATCGAAAATTTTAGAATGGCTCCAAGAGCCATTCTTTATGACACTTGGT
ATAAGAGAAAGATTGCATGT

Product: squalene/phytoene synthase

Products: diphosphate; prephytoene diphosphate

Alternate protein names: Phytoene Synthase; Phytoene Synthase Protein; Squalene And Phytoene Synthases Superfamily; Phytoene/Squalene Synthetase-Like Protein; Phytoene Synthase Family Protein; Squalene Synthase HpnD; Squalene; Phytoene/Squalene Synthetase; Terpenoid Synthase

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MHARTEDYTYCEDMVRRDDPDRWLASLFIEQPFRKHAYALYAFNLEIARAREVVTEPILGEIRFQWWRDILEPPEGEDNK
IESETQGHVMANPVAAAVLDTIERFALPRERFIGMIEARTFDLYDAPMRTLAELESYGLSTAGSLFYLVASVLSGPETPG
LLAAAEPAGLAYGLTGLMRALPWHSARGQDYVPCEMLSRHKADLEEIIGGIASPGVFATLAEMRGLARQQISLFEQRIAA
VPLKARAAFLPVCFTSPYLKQMDKRGYAPFRVPIMLPQWRKQWILWRASKRLRGV

Sequences:

>Translated_295_residues
MHARTEDYTYCEDMVRRDDPDRWLASLFIEQPFRKHAYALYAFNLEIARAREVVTEPILGEIRFQWWRDILEPPEGEDNK
IESETQGHVMANPVAAAVLDTIERFALPRERFIGMIEARTFDLYDAPMRTLAELESYGLSTAGSLFYLVASVLSGPETPG
LLAAAEPAGLAYGLTGLMRALPWHSARGQDYVPCEMLSRHKADLEEIIGGIASPGVFATLAEMRGLARQQISLFEQRIAA
VPLKARAAFLPVCFTSPYLKQMDKRGYAPFRVPIMLPQWRKQWILWRASKRLRGV
>Mature_295_residues
MHARTEDYTYCEDMVRRDDPDRWLASLFIEQPFRKHAYALYAFNLEIARAREVVTEPILGEIRFQWWRDILEPPEGEDNK
IESETQGHVMANPVAAAVLDTIERFALPRERFIGMIEARTFDLYDAPMRTLAELESYGLSTAGSLFYLVASVLSGPETPG
LLAAAEPAGLAYGLTGLMRALPWHSARGQDYVPCEMLSRHKADLEEIIGGIASPGVFATLAEMRGLARQQISLFEQRIAA
VPLKARAAFLPVCFTSPYLKQMDKRGYAPFRVPIMLPQWRKQWILWRASKRLRGV

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI124517691, Length=285, Percent_Identity=25.9649122807018, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI25150675, Length=299, Percent_Identity=26.7558528428094, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24641447, Length=261, Percent_Identity=26.0536398467433, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.32

Molecular weight: Translated: 33491; Mature: 33491

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHARTEDYTYCEDMVRRDDPDRWLASLFIEQPFRKHAYALYAFNLEIARAREVVTEPILG
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHEEECHHHHHHHHHHHHHHHH
EIRFQWWRDILEPPEGEDNKIESETQGHVMANPVAAAVLDTIERFALPRERFIGMIEART
HHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHE
FDLYDAPMRTLAELESYGLSTAGSLFYLVASVLSGPETPGLLAAAEPAGLAYGLTGLMRA
ECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHH
LPWHSARGQDYVPCEMLSRHKADLEEIIGGIASPGVFATLAEMRGLARQQISLFEQRIAA
CCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VPLKARAAFLPVCFTSPYLKQMDKRGYAPFRVPIMLPQWRKQWILWRASKRLRGV
CCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHARTEDYTYCEDMVRRDDPDRWLASLFIEQPFRKHAYALYAFNLEIARAREVVTEPILG
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHEEECHHHHHHHHHHHHHHHH
EIRFQWWRDILEPPEGEDNKIESETQGHVMANPVAAAVLDTIERFALPRERFIGMIEART
HHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHE
FDLYDAPMRTLAELESYGLSTAGSLFYLVASVLSGPETPGLLAAAEPAGLAYGLTGLMRA
ECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHH
LPWHSARGQDYVPCEMLSRHKADLEEIIGGIASPGVFATLAEMRGLARQQISLFEQRIAA
CCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VPLKARAAFLPVCFTSPYLKQMDKRGYAPFRVPIMLPQWRKQWILWRASKRLRGV
CCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: geranylgeranyl diphosphate

Specific reaction: 2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA