| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677989
Identifier: 182677989
GI number: 182677989
Start: 1149671
End: 1150045
Strand: Direct
Name: 182677989
Synonym: Bind_1003
Alternate gene names: NA
Gene position: 1149671-1150045 (Clockwise)
Preceding gene: 182677988
Following gene: 182677990
Centisome position: 27.57
GC content: 64.0
Gene sequence:
>375_bases ATGGCGCAAGGATTTCTGCCGGGTCAACATGCCATAGAGGGCTATGGCAATGGCGGTTTCCGTTTCGGCGGCATGTCGCA TCGCGGCTCCATCCTCGCTCTGCCGTCTGGCATTTACTCCTGGGACCCTTTGCGGCCAGAAGACATCACTCTTGCTTCGC TCGAAACCGTTTTCGCGGAGCCGAAGGGGACCATTGATCATTTGCTGATCGGCACGGGGGTCGATCTCGTTCCTCTCCCG CCTGCGCTCGCGCAAAAGCTGCGCGAGGCGGGCATCAGGCCCGAACCCATGCCGACGGGCGCCGCGGCGCGGACCTATCC GATCCTGCTCGGAGAAAGGCGCCTCGTCGCGGCGGCGCTGCTGGCGGTGCCCTAA
Upstream 100 bases:
>100_bases CTTTGTCAGACTTTCGAATGTTCGTCCTGCCCGTGACGAGGTGAAAATTCAAAACGGCACCAAGAGTTATTGATCACACT CTTGGGTGGAAGGTGTTGTC
Downstream 100 bases:
>100_bases TGCATGCACGCACGGAAGATTACACATATTGTGAAGACATGGTCCGGCGCGATGATCCCGATCGCTGGCTGGCCTCTCTG TTCATTGAACAGCCCTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF124 [H]
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MAQGFLPGQHAIEGYGNGGFRFGGMSHRGSILALPSGIYSWDPLRPEDITLASLETVFAEPKGTIDHLLIGTGVDLVPLP PALAQKLREAGIRPEPMPTGAAARTYPILLGERRLVAAALLAVP
Sequences:
>Translated_124_residues MAQGFLPGQHAIEGYGNGGFRFGGMSHRGSILALPSGIYSWDPLRPEDITLASLETVFAEPKGTIDHLLIGTGVDLVPLP PALAQKLREAGIRPEPMPTGAAARTYPILLGERRLVAAALLAVP >Mature_123_residues AQGFLPGQHAIEGYGNGGFRFGGMSHRGSILALPSGIYSWDPLRPEDITLASLETVFAEPKGTIDHLLIGTGVDLVPLPP ALAQKLREAGIRPEPMPTGAAARTYPILLGERRLVAAALLAVP
Specific function: Not required for the biogenesis of c-type cytochromes [H]
COG id: COG3737
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007523 [H]
Pfam domain/function: PF04430 DUF498 [H]
EC number: NA
Molecular weight: Translated: 13064; Mature: 12933
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQGFLPGQHAIEGYGNGGFRFGGMSHRGSILALPSGIYSWDPLRPEDITLASLETVFAE CCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHCC PKGTIDHLLIGTGVDLVPLPPALAQKLREAGIRPEPMPTGAAARTYPILLGERRLVAAAL CCCCCCEEEECCCCCCEECCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH LAVP HHCC >Mature Secondary Structure AQGFLPGQHAIEGYGNGGFRFGGMSHRGSILALPSGIYSWDPLRPEDITLASLETVFAE CCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHCC PKGTIDHLLIGTGVDLVPLPPALAQKLREAGIRPEPMPTGAAARTYPILLGERRLVAAAL CCCCCCEEEECCCCCCEECCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH LAVP HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1310666 [H]