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The map label for this gene is oxdD [H]

Identifier: 182677972

GI number: 182677972

Start: 1128802

End: 1130019

Strand: Direct

Name: oxdD [H]

Synonym: Bind_0985

Alternate gene names: 182677972

Gene position: 1128802-1130019 (Clockwise)

Preceding gene: 182677969

Following gene: 182677973

Centisome position: 27.07

GC content: 55.01

Gene sequence:

>1218_bases
ATGACTGATTATTCTCGGCGTAAAATTCTCGCGGCTGGCGCGGCCGGTGGTCTGCTTGCGGCAAGCACGGCTCGCAGTGC
TCAGGAAGGGACAGCCTATCCTTCCGCTAATCCCGCCGTGAGCTATCCAGGCCCGCACGATCCGCGCGAGGAAGCCCTCA
ATCCGAGCGCTTTGAATCCGCTTTCGACCGATCACGGCAATCTTGGCACGTTGAAATTTTCTTTTTCCGAGGTGCACAAT
CGGCATACGGATGCGGGTTGGGCACGCGAAGTCACGGTGCGCAATTTTCCGGCCTCCAAGGCCATGGCCGGCGTCAACAT
GCGCCTCCCCAAGGGGGCTGTTCGCGAATTGCATTGGCATTTGCCAGCGGAATGGGCCTATGTGACCTATGGCACGGGGC
GGATTACTGCAGTCGATGGCGACGCCAAACGGTTCGTCGCCGACGTGAAGGAAGGAGACCTCTGGTTCTTTCCCTCGGGC
ATTCCGCATTCGATCCAGGGCCTTGGCCCGGATGGCTGCGAATTCGTCCTCGTCTTCAACGATGGCAATTTCTCCGAGGA
TAGCACCTTTCTCATCAGCGACTGGATCGCGCATACACCCACCGATATTCTCGCCAAGAATTTCAATCTTCCAGAATCCG
CCTTTGCAAATATTCCCCACAAGGATTTGTGGATCTTCAACGCGCCCATGCCGGGGAGTCTAGAAAGCGATTTGGCGCAA
AGCAATCGTCCTGACGTGCCCAATTCCTATAAATTTGCCTTGATGGATCAGACGCCAATCAAGACGCGCAGCGGGACGGT
GCGGATTGCCGATGTGAATAATTTCAAAGCTTCAACGAACATGTCCGCGGCCTTGGTTGAGGTCGAACCTGGCGGTATGC
GTGAGCTTCACTGGCATCCAAATTCAGATGAATGGCAATATTATATCAGTGGTTCCGGCCGTATGACGGTTTTCGCCAAT
GAGGGGCGCGCCAACACATTCGATTTCAGCCCGAGCGATGTCGGCTATGTTCCCCGTTCGACAGGTCACTATATTCTCAA
TACAGGCAAGGATACTTTGCGCTTTCTGGAGGTCTTCACGACCGGGCAATATTCCGATATTTCCTTGACATCGTGGATGG
CAAACACACCGCATGAATTGGTGGCGGCGCATCTCAATATGGATGTTTCCCAGCTACGGCAGCTCGCACAAAACAAGACG
CCTGTCGTGCCGGCCTGA

Upstream 100 bases:

>100_bases
ATCGCAGTCATCGTTCTTTGCCTTGTTCCCAAACAAAGCCGCGGTCCTCATTCTACCGCAGCCTTCGATATAAAGGGCGT
ATGAAGGGAAGGAGCGCATC

Downstream 100 bases:

>100_bases
AAGCATATACAAAGAATATGGGCAGCATCGGTCCCGGAAGTGGTTGCTCCTTTCGGAATCGATGCGATAGCGCTGCGCGC
CGGTATAAAGTTTGCTCAAG

Product: oxalate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTDYSRRKILAAGAAGGLLAASTARSAQEGTAYPSANPAVSYPGPHDPREEALNPSALNPLSTDHGNLGTLKFSFSEVHN
RHTDAGWAREVTVRNFPASKAMAGVNMRLPKGAVRELHWHLPAEWAYVTYGTGRITAVDGDAKRFVADVKEGDLWFFPSG
IPHSIQGLGPDGCEFVLVFNDGNFSEDSTFLISDWIAHTPTDILAKNFNLPESAFANIPHKDLWIFNAPMPGSLESDLAQ
SNRPDVPNSYKFALMDQTPIKTRSGTVRIADVNNFKASTNMSAALVEVEPGGMRELHWHPNSDEWQYYISGSGRMTVFAN
EGRANTFDFSPSDVGYVPRSTGHYILNTGKDTLRFLEVFTTGQYSDISLTSWMANTPHELVAAHLNMDVSQLRQLAQNKT
PVVPA

Sequences:

>Translated_405_residues
MTDYSRRKILAAGAAGGLLAASTARSAQEGTAYPSANPAVSYPGPHDPREEALNPSALNPLSTDHGNLGTLKFSFSEVHN
RHTDAGWAREVTVRNFPASKAMAGVNMRLPKGAVRELHWHLPAEWAYVTYGTGRITAVDGDAKRFVADVKEGDLWFFPSG
IPHSIQGLGPDGCEFVLVFNDGNFSEDSTFLISDWIAHTPTDILAKNFNLPESAFANIPHKDLWIFNAPMPGSLESDLAQ
SNRPDVPNSYKFALMDQTPIKTRSGTVRIADVNNFKASTNMSAALVEVEPGGMRELHWHPNSDEWQYYISGSGRMTVFAN
EGRANTFDFSPSDVGYVPRSTGHYILNTGKDTLRFLEVFTTGQYSDISLTSWMANTPHELVAAHLNMDVSQLRQLAQNKT
PVVPA
>Mature_404_residues
TDYSRRKILAAGAAGGLLAASTARSAQEGTAYPSANPAVSYPGPHDPREEALNPSALNPLSTDHGNLGTLKFSFSEVHNR
HTDAGWAREVTVRNFPASKAMAGVNMRLPKGAVRELHWHLPAEWAYVTYGTGRITAVDGDAKRFVADVKEGDLWFFPSGI
PHSIQGLGPDGCEFVLVFNDGNFSEDSTFLISDWIAHTPTDILAKNFNLPESAFANIPHKDLWIFNAPMPGSLESDLAQS
NRPDVPNSYKFALMDQTPIKTRSGTVRIADVNNFKASTNMSAALVEVEPGGMRELHWHPNSDEWQYYISGSGRMTVFANE
GRANTFDFSPSDVGYVPRSTGHYILNTGKDTLRFLEVFTTGQYSDISLTSWMANTPHELVAAHLNMDVSQLRQLAQNKTP
VVPA

Specific function: Converts oxalate to formate and CO(2) [H]

COG id: COG2140

COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis oxdC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017774
- InterPro:   IPR006045
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00190 Cupin_1 [H]

EC number: =4.1.1.2 [H]

Molecular weight: Translated: 44369; Mature: 44238

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDYSRRKILAAGAAGGLLAASTARSAQEGTAYPSANPAVSYPGPHDPREEALNPSALNP
CCCCCCCEEEEECCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
LSTDHGNLGTLKFSFSEVHNRHTDAGWAREVTVRNFPASKAMAGVNMRLPKGAVRELHWH
CCCCCCCEEEEEEEHHHHHCCCCCCCCEEEEEEECCCCHHHHCCCEEECCCHHHHHHHCC
LPAEWAYVTYGTGRITAVDGDAKRFVADVKEGDLWFFPSGIPHSIQGLGPDGCEFVLVFN
CCCCEEEEEECCCEEEEECCCHHHHHHCCCCCCEEEECCCCCHHCCCCCCCCCEEEEEEC
DGNFSEDSTFLISDWIAHTPTDILAKNFNLPESAFANIPHKDLWIFNAPMPGSLESDLAQ
CCCCCCCCEEEEEHHHHHCCHHHHHHCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHHH
SNRPDVPNSYKFALMDQTPIKTRSGTVRIADVNNFKASTNMSAALVEVEPGGMRELHWHP
CCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECC
NSDEWQYYISGSGRMTVFANEGRANTFDFSPSDVGYVPRSTGHYILNTGKDTLRFLEVFT
CCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH
TGQYSDISLTSWMANTPHELVAAHLNMDVSQLRQLAQNKTPVVPA
CCCCCCEEEEHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDYSRRKILAAGAAGGLLAASTARSAQEGTAYPSANPAVSYPGPHDPREEALNPSALNP
CCCCCCEEEEECCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
LSTDHGNLGTLKFSFSEVHNRHTDAGWAREVTVRNFPASKAMAGVNMRLPKGAVRELHWH
CCCCCCCEEEEEEEHHHHHCCCCCCCCEEEEEEECCCCHHHHCCCEEECCCHHHHHHHCC
LPAEWAYVTYGTGRITAVDGDAKRFVADVKEGDLWFFPSGIPHSIQGLGPDGCEFVLVFN
CCCCEEEEEECCCEEEEECCCHHHHHHCCCCCCEEEECCCCCHHCCCCCCCCCEEEEEEC
DGNFSEDSTFLISDWIAHTPTDILAKNFNLPESAFANIPHKDLWIFNAPMPGSLESDLAQ
CCCCCCCCEEEEEHHHHHCCHHHHHHCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHHH
SNRPDVPNSYKFALMDQTPIKTRSGTVRIADVNNFKASTNMSAALVEVEPGGMRELHWHP
CCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECC
NSDEWQYYISGSGRMTVFANEGRANTFDFSPSDVGYVPRSTGHYILNTGKDTLRFLEVFT
CCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH
TGQYSDISLTSWMANTPHELVAAHLNMDVSQLRQLAQNKTPVVPA
CCCCCCEEEEHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11546787 [H]