Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is 182677952

Identifier: 182677952

GI number: 182677952

Start: 1102512

End: 1104833

Strand: Direct

Name: 182677952

Synonym: Bind_0965

Alternate gene names: NA

Gene position: 1102512-1104833 (Clockwise)

Preceding gene: 182677951

Following gene: 182677953

Centisome position: 26.44

GC content: 52.84

Gene sequence:

>2322_bases
ATGTTTGCTCCCCTTGAGCACACTGGTGCAATTGCCAAATCGCCAGCCTCTTCACCTCGCCATAAGAGAAAAAAGCATAT
TACTCCCTTGATCGTGGGACTGGGACTTGTGCCAAGTTCCTGTCTGGCACAGGCGACACCATCCAATCTGCCAACCATCG
AAGTCGTTGGTAAACGTGACGAGCCACCGATGAACCCTATCGACCATACAGCGATGGGGCATGAGGTGAGTGGCGAACGC
CTCGCCAGCAAGAGAGTTATTTCGCCCGATACGGCACTCTTGCTGAAAGAGGTGCCGGGCATAAGCCTCGCCCAGGGAGG
CGGCCTATCAAGCCTGCCGGTCATTCATGGCCTCAATGATGACCGCAATGCCATTGAGATCGGCGGCATATCGATCACTT
CAGCCTGCGGCAACCATATGAATCCACCACTATCCTATATCGACCCGAGTAATATCTCTAAAATCGAAGTCCTGACGGCG
CTTATTCCTGTCAGCAAAGGCGGCGATTCCATCGGTGGGTCAATCATTGTGACCCCGCGCGAGCCTATCTTTGCGCCTCC
TGTCCCCACGCAAGTATCAGTAACTCAGGACAACTTGCCAATTCTGGCTTCGGATAATACACCCGTTTTCAGCGGTTCCC
TGTCGCTCTTCTATCGTTCGAACAATAAAAATCCGACCATTGCCGGAACGGCATCAGCCGCGACTGAGCATTTCAGTGTC
AATTATACGGGCGCTTGGACCAAGGCATCGAATTATCACGCAGGTGGTGGCGTCGAGGTCCCCTCGACAAGCTTTGCGGC
GCAAAACCATTCCGCAACCATCGCCTATCGCAAAGAGGATCAATTCATTGCGCTCCGTGCCGCCTATCAGGATATTCCCT
ACCAGGGCTTCGTCAATCAGCGCATGGATATGCTGGGAAACAAATCTCTGAATTTCGACTTAACTTACAAAGGTGGCTTC
GACTGGGGACGTGCCGAGGCCAATGCCTATTACCAACATACACGGCATTACATGAATTTTCTAGCTGACAAGAACGGTGG
CATCGAAGCAACATCAACGACCGGAATGCCGATGTATACGAGTGGAACGGATTTCGGCTATAGGTTCAAGAGCGAGATTC
TAGCCAGCCAGATTGATAGCATCCGAATCGGTAATGAGTTTCACGGACAATCGCTCAATGACTGGTGGCCACCCGTCGCT
GGTTCCACGCCCAGCATGGGTTCCATGTCTATGAGCATGAGCAGCATGATGTGCTGCGAAACGTTCCAGAACATCAATAA
TGGTACACGTGACAGGCTTGGAACCTACGTCGAATGGGAGAGAAGCTGGACACAAAGCTGGTCGACCCTGATCGGGATAC
GTAATGATCTCGTCTGGACCAATACGCAGAATGTCGAGGGGTACAATACCATGATGTATGGTGCAGATGCTGCTCGATTC
AATGCCTCCAACCATGCCCGCATGGATATCAATTTTGATGTGACAGCGCTCGTGCGTTTTGCTCCTGACGCCGGCAGCCT
CATCGAGGCCGGCTACACCCGCAAGACACGCTCCCCCAGTCTTTACGAACGTTATACGTGGTCAACGAATGCCATGGCTT
CGGAAATGAACAACTGGTTTGGTGACGGTAACGGTTACGTCGGCAACATTGCCCTTAAACCAGAGGTTGCGCATACGTTC
AGTATCAGTGCGAGCTGGCGGGACGCGGTCGAAGGAGGTTTTGAGGCGAAGGTCACACCCTATTACATGCATATCGAAAA
CTATATTGACGTCGATAAGCTGGGCGTGCTCGGCACTGGCTCCGGCCAGGTCAATCTGCTGCAATTCGCCAATCATGATG
CTGAAATTTTTGGTGTCGACTTTTCGGGAAGAGCTCGCCTGTTCCGTTCAGAGGATGCTGGCACTTTGACGCTCACGGGT
GTTGCAAGCTATACACGCGGAAGGCGCCTCGATGACAGCGGCAGCCTCTATCATATGATGCCGATGAACGGCAAAGTCGC
GATCGAGCATCAGATCCCGTTGCTCGGAGGTGTTCTGACAACAGCTCTCGAAGGAGAAGCAGTTGCGGCAAAGACGAATG
TTCAGACCCTGCGTCTCGAACCGCAAACCCCCGCATATGGCCTGATGAATGTTCGCACCGCCTTTGAATTCGCCAATCTG
CGGTTTGATGCCGGCGTCGAAAATCTCTTCGACCGGCTGTATTATTCACCACTCGGCGGCGTCGATATTGCCAGCTACAA
GGCCGGTCTTAATAGCGTCCTACAAACGCCTGTTGCAGGAATAGGCCGCACGATCTATGGCGGCATGACCATACGCTTCT
GA

Upstream 100 bases:

>100_bases
CTTCATCGATCGTAAGCGGCGACCGCGTGCACACCCTGCATGCGCATGAACGCTCGCCGCGAGATAGGGAAGGGATTGAG
TCAATTCAAATGAGACATGT

Downstream 100 bases:

>100_bases
TAAAGTAGGCGGGCGTGCCGCAAAATTGGCCTGTTGACACAGATCAGCGTCAACAGGCCTGATCTTTATGCTTTATTGAC
CGCTTGCGATTTGGAAGACT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB Dependent Receptor; NB-Dependent Receptor Protein; NB-Dependent Receptor Domain Protein; Outer Membrane Protein; NB-Dependent Receptor Plug; Outer Membrane Insertion C-Terminal Signal; Outer Membrane Receptor Protein; IMP Dehydrogenase/GMP Reductase; Outer Membrane Protein NosA; NB-Dependent Copper Receptor Protein; Outer Membrane Protein C; Iron Complex Outermembrane Recepter Protein; Nb-Dependent Receptor

Number of amino acids: Translated: 773; Mature: 773

Protein sequence:

>773_residues
MFAPLEHTGAIAKSPASSPRHKRKKHITPLIVGLGLVPSSCLAQATPSNLPTIEVVGKRDEPPMNPIDHTAMGHEVSGER
LASKRVISPDTALLLKEVPGISLAQGGGLSSLPVIHGLNDDRNAIEIGGISITSACGNHMNPPLSYIDPSNISKIEVLTA
LIPVSKGGDSIGGSIIVTPREPIFAPPVPTQVSVTQDNLPILASDNTPVFSGSLSLFYRSNNKNPTIAGTASAATEHFSV
NYTGAWTKASNYHAGGGVEVPSTSFAAQNHSATIAYRKEDQFIALRAAYQDIPYQGFVNQRMDMLGNKSLNFDLTYKGGF
DWGRAEANAYYQHTRHYMNFLADKNGGIEATSTTGMPMYTSGTDFGYRFKSEILASQIDSIRIGNEFHGQSLNDWWPPVA
GSTPSMGSMSMSMSSMMCCETFQNINNGTRDRLGTYVEWERSWTQSWSTLIGIRNDLVWTNTQNVEGYNTMMYGADAARF
NASNHARMDINFDVTALVRFAPDAGSLIEAGYTRKTRSPSLYERYTWSTNAMASEMNNWFGDGNGYVGNIALKPEVAHTF
SISASWRDAVEGGFEAKVTPYYMHIENYIDVDKLGVLGTGSGQVNLLQFANHDAEIFGVDFSGRARLFRSEDAGTLTLTG
VASYTRGRRLDDSGSLYHMMPMNGKVAIEHQIPLLGGVLTTALEGEAVAAKTNVQTLRLEPQTPAYGLMNVRTAFEFANL
RFDAGVENLFDRLYYSPLGGVDIASYKAGLNSVLQTPVAGIGRTIYGGMTIRF

Sequences:

>Translated_773_residues
MFAPLEHTGAIAKSPASSPRHKRKKHITPLIVGLGLVPSSCLAQATPSNLPTIEVVGKRDEPPMNPIDHTAMGHEVSGER
LASKRVISPDTALLLKEVPGISLAQGGGLSSLPVIHGLNDDRNAIEIGGISITSACGNHMNPPLSYIDPSNISKIEVLTA
LIPVSKGGDSIGGSIIVTPREPIFAPPVPTQVSVTQDNLPILASDNTPVFSGSLSLFYRSNNKNPTIAGTASAATEHFSV
NYTGAWTKASNYHAGGGVEVPSTSFAAQNHSATIAYRKEDQFIALRAAYQDIPYQGFVNQRMDMLGNKSLNFDLTYKGGF
DWGRAEANAYYQHTRHYMNFLADKNGGIEATSTTGMPMYTSGTDFGYRFKSEILASQIDSIRIGNEFHGQSLNDWWPPVA
GSTPSMGSMSMSMSSMMCCETFQNINNGTRDRLGTYVEWERSWTQSWSTLIGIRNDLVWTNTQNVEGYNTMMYGADAARF
NASNHARMDINFDVTALVRFAPDAGSLIEAGYTRKTRSPSLYERYTWSTNAMASEMNNWFGDGNGYVGNIALKPEVAHTF
SISASWRDAVEGGFEAKVTPYYMHIENYIDVDKLGVLGTGSGQVNLLQFANHDAEIFGVDFSGRARLFRSEDAGTLTLTG
VASYTRGRRLDDSGSLYHMMPMNGKVAIEHQIPLLGGVLTTALEGEAVAAKTNVQTLRLEPQTPAYGLMNVRTAFEFANL
RFDAGVENLFDRLYYSPLGGVDIASYKAGLNSVLQTPVAGIGRTIYGGMTIRF
>Mature_773_residues
MFAPLEHTGAIAKSPASSPRHKRKKHITPLIVGLGLVPSSCLAQATPSNLPTIEVVGKRDEPPMNPIDHTAMGHEVSGER
LASKRVISPDTALLLKEVPGISLAQGGGLSSLPVIHGLNDDRNAIEIGGISITSACGNHMNPPLSYIDPSNISKIEVLTA
LIPVSKGGDSIGGSIIVTPREPIFAPPVPTQVSVTQDNLPILASDNTPVFSGSLSLFYRSNNKNPTIAGTASAATEHFSV
NYTGAWTKASNYHAGGGVEVPSTSFAAQNHSATIAYRKEDQFIALRAAYQDIPYQGFVNQRMDMLGNKSLNFDLTYKGGF
DWGRAEANAYYQHTRHYMNFLADKNGGIEATSTTGMPMYTSGTDFGYRFKSEILASQIDSIRIGNEFHGQSLNDWWPPVA
GSTPSMGSMSMSMSSMMCCETFQNINNGTRDRLGTYVEWERSWTQSWSTLIGIRNDLVWTNTQNVEGYNTMMYGADAARF
NASNHARMDINFDVTALVRFAPDAGSLIEAGYTRKTRSPSLYERYTWSTNAMASEMNNWFGDGNGYVGNIALKPEVAHTF
SISASWRDAVEGGFEAKVTPYYMHIENYIDVDKLGVLGTGSGQVNLLQFANHDAEIFGVDFSGRARLFRSEDAGTLTLTG
VASYTRGRRLDDSGSLYHMMPMNGKVAIEHQIPLLGGVLTTALEGEAVAAKTNVQTLRLEPQTPAYGLMNVRTAFEFANL
RFDAGVENLFDRLYYSPLGGVDIASYKAGLNSVLQTPVAGIGRTIYGGMTIRF

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83928; Mature: 83928

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAPLEHTGAIAKSPASSPRHKRKKHITPLIVGLGLVPSSCLAQATPSNLPTIEVVGKRD
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCHHHHHCCCCCCCCEEEEECCCC
EPPMNPIDHTAMGHEVSGERLASKRVISPDTALLLKEVPGISLAQGGGLSSLPVIHGLND
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCEEECCCCCCCCCEEECCCC
DRNAIEIGGISITSACGNHMNPPLSYIDPSNISKIEVLTALIPVSKGGDSIGGSIIVTPR
CCCEEEECCEEEEHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECC
EPIFAPPVPTQVSVTQDNLPILASDNTPVFSGSLSLFYRSNNKNPTIAGTASAATEHFSV
CCCCCCCCCCEEEEECCCCCEEECCCCCEEECCEEEEEECCCCCCEEEECCCCCCEEEEE
NYTGAWTKASNYHAGGGVEVPSTSFAAQNHSATIAYRKEDQFIALRAAYQDIPYQGFVNQ
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHCCCCCHHHHH
RMDMLGNKSLNFDLTYKGGFDWGRAEANAYYQHTRHYMNFLADKNGGIEATSTTGMPMYT
HHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEE
SGTDFGYRFKSEILASQIDSIRIGNEFHGQSLNDWWPPVAGSTPSMGSMSMSMSSMMCCE
CCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
TFQNINNGTRDRLGTYVEWERSWTQSWSTLIGIRNDLVWTNTQNVEGYNTMMYGADAARF
HHHHCCCCCHHHCCCEEEEHHHHHHHHHHHHEECCCEEEECCCCCCCCEEEEECCCHHEE
NASNHARMDINFDVTALVRFAPDAGSLIEAGYTRKTRSPSLYERYTWSTNAMASEMNNWF
CCCCCEEEEECCCEEEEEEECCCCCCHHHCCCCCCCCCCCHHHEEECCCHHHHHHHHHHC
GDGNGYVGNIALKPEVAHTFSISASWRDAVEGGFEAKVTPYYMHIENYIDVDKLGVLGTG
CCCCCEEEEEEECCCCEEEEEECCCHHHHHCCCCCCEEEEEEEEECCCCCHHHCCEEECC
SGQVNLLQFANHDAEIFGVDFSGRARLFRSEDAGTLTLTGVASYTRGRRLDDSGSLYHMM
CCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEEHHHHCCCCCCCCCCEEEEE
PMNGKVAIEHQIPLLGGVLTTALEGEAVAAKTNVQTLRLEPQTPAYGLMNVRTAFEFANL
CCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHCE
RFDAGVENLFDRLYYSPLGGVDIASYKAGLNSVLQTPVAGIGRTIYGGMTIRF
EECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHCCCEEECCEEEEC
>Mature Secondary Structure
MFAPLEHTGAIAKSPASSPRHKRKKHITPLIVGLGLVPSSCLAQATPSNLPTIEVVGKRD
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCHHHHHCCCCCCCCEEEEECCCC
EPPMNPIDHTAMGHEVSGERLASKRVISPDTALLLKEVPGISLAQGGGLSSLPVIHGLND
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCEEECCCCCCCCCEEECCCC
DRNAIEIGGISITSACGNHMNPPLSYIDPSNISKIEVLTALIPVSKGGDSIGGSIIVTPR
CCCEEEECCEEEEHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECC
EPIFAPPVPTQVSVTQDNLPILASDNTPVFSGSLSLFYRSNNKNPTIAGTASAATEHFSV
CCCCCCCCCCEEEEECCCCCEEECCCCCEEECCEEEEEECCCCCCEEEECCCCCCEEEEE
NYTGAWTKASNYHAGGGVEVPSTSFAAQNHSATIAYRKEDQFIALRAAYQDIPYQGFVNQ
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHCCCCCHHHHH
RMDMLGNKSLNFDLTYKGGFDWGRAEANAYYQHTRHYMNFLADKNGGIEATSTTGMPMYT
HHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEE
SGTDFGYRFKSEILASQIDSIRIGNEFHGQSLNDWWPPVAGSTPSMGSMSMSMSSMMCCE
CCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
TFQNINNGTRDRLGTYVEWERSWTQSWSTLIGIRNDLVWTNTQNVEGYNTMMYGADAARF
HHHHCCCCCHHHCCCEEEEHHHHHHHHHHHHEECCCEEEECCCCCCCCEEEEECCCHHEE
NASNHARMDINFDVTALVRFAPDAGSLIEAGYTRKTRSPSLYERYTWSTNAMASEMNNWF
CCCCCEEEEECCCEEEEEEECCCCCCHHHCCCCCCCCCCCHHHEEECCCHHHHHHHHHHC
GDGNGYVGNIALKPEVAHTFSISASWRDAVEGGFEAKVTPYYMHIENYIDVDKLGVLGTG
CCCCCEEEEEEECCCCEEEEEECCCHHHHHCCCCCCEEEEEEEEECCCCCHHHCCEEECC
SGQVNLLQFANHDAEIFGVDFSGRARLFRSEDAGTLTLTGVASYTRGRRLDDSGSLYHMM
CCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEEHHHHCCCCCCCCCCEEEEE
PMNGKVAIEHQIPLLGGVLTTALEGEAVAAKTNVQTLRLEPQTPAYGLMNVRTAFEFANL
CCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHCE
RFDAGVENLFDRLYYSPLGGVDIASYKAGLNSVLQTPVAGIGRTIYGGMTIRF
EECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHCCCEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA