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The map label for this gene is ydeP [H]

Identifier: 182677941

GI number: 182677941

Start: 1091261

End: 1091614

Strand: Direct

Name: ydeP [H]

Synonym: Bind_0952

Alternate gene names: 182677941

Gene position: 1091261-1091614 (Clockwise)

Preceding gene: 182677938

Following gene: 182677943

Centisome position: 26.17

GC content: 59.04

Gene sequence:

>354_bases
ATGGCCCGGATTCGTCATAAGGAACTGACTTGCAGCCCTGGTTGCGCCGTCGAGGCGACGCTGCAATTCATCGACGGCAA
GTGGAAAGGCGTGGTCCTCTACCATTTGCTCAAGGGCACGCTGCGGTTCAACGAAATCAGGCGGCGCCTGCCGAATGTGA
CGCAACGGATGCTGACCAATCAATTGCGCGAATTGGAGAGGGATGGGTTCATCGAGCGAACGGTCTATGCGGAAGTACCG
CCTCGCGTCGAATATAGCCTCTCCGAGCGCGGGCTTAGTCTGGAGCCGGTCATCGTGGCGTTGAAAGCCTGGGGCGACGC
CAATAAGGACCTTTGGCTGCCTGCCGAGGAGTGA

Upstream 100 bases:

>100_bases
CTTATGATCCGGCCTCTTCCACAGCGGCTAAAAGACAGGTTATTTTCAAAGGTGACAAGAACGCACTTTAATCGCTCATA
GTGTCGAGAATGATACCGTC

Downstream 100 bases:

>100_bases
GGCGATTTTTTCAAAGAGAGTGGCCTATAGCACCGCTCCTCAATCTGTATGAATGAGCGGTGCTGCCGTTTATGCTAAGC
CAAAGTGGCCTTCTATTCCG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MARIRHKELTCSPGCAVEATLQFIDGKWKGVVLYHLLKGTLRFNEIRRRLPNVTQRMLTNQLRELERDGFIERTVYAEVP
PRVEYSLSERGLSLEPVIVALKAWGDANKDLWLPAEE

Sequences:

>Translated_117_residues
MARIRHKELTCSPGCAVEATLQFIDGKWKGVVLYHLLKGTLRFNEIRRRLPNVTQRMLTNQLRELERDGFIERTVYAEVP
PRVEYSLSERGLSLEPVIVALKAWGDANKDLWLPAEE
>Mature_116_residues
ARIRHKELTCSPGCAVEATLQFIDGKWKGVVLYHLLKGTLRFNEIRRRLPNVTQRMLTNQLRELERDGFIERTVYAEVPP
RVEYSLSERGLSLEPVIVALKAWGDANKDLWLPAEE

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=94, Percent_Identity=37.2340425531915, Blast_Score=76, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13519; Mature: 13388

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIRHKELTCSPGCAVEATLQFIDGKWKGVVLYHLLKGTLRFNEIRRRLPNVTQRMLTN
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLRELERDGFIERTVYAEVPPRVEYSLSERGLSLEPVIVALKAWGDANKDLWLPAEE
HHHHHHHCCCEEEEEEECCCCCCCCCHHCCCCCCCHHEEEEECCCCCCCCEECCCCC
>Mature Secondary Structure 
ARIRHKELTCSPGCAVEATLQFIDGKWKGVVLYHLLKGTLRFNEIRRRLPNVTQRMLTN
CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLRELERDGFIERTVYAEVPPRVEYSLSERGLSLEPVIVALKAWGDANKDLWLPAEE
HHHHHHHCCCEEEEEEECCCCCCCCCHHCCCCCCCHHEEEEECCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]