| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is mrcA [H]
Identifier: 182677926
GI number: 182677926
Start: 1069249
End: 1071660
Strand: Direct
Name: mrcA [H]
Synonym: Bind_0934
Alternate gene names: 182677926
Gene position: 1069249-1071660 (Clockwise)
Preceding gene: 182677925
Following gene: 182677927
Centisome position: 25.64
GC content: 59.33
Gene sequence:
>2412_bases ATGCGGCTTATCGCCCGTTTTTTCGGTTTCCTCTTCGCGACAGCCGCCATTCTCTTCGTTGTCGGCGCTTGCGCGGCAGG CTTTCTTGTCTGGAATTTCCAGCGCGACCTGCCCGATTATACGCAGCTCAAGAATTACGAGCCGCCGGTAATGACGCGCG TCCATGCCGCCGATGGGTCGATTCTCGCCGAATATGCGCATGAGCGTCGGCTTTATCTGCCGAGCACGGCGATCCCGCCA CTGATCAAACAGGCTTTTATTTCGGCCGAGGACAAGAATTTCTATAATCACAGCGGTGTCGACCCGGAAGGCATCCTGCG CGCCTTTATGGTGCTGGTCGAGGGTGGCCATCATGTCCAGGGCGCTTCAACGATTACGCAACAGGTCGCCAAGAACTTTC TGCTGACCAATGAACGCTCCTTCGATCGCAAGATCCGTGAGGCCTTGCTCGCCTTCCGGATCGAGGGCGCCTATTCCAAG GAACGCATTCTCGAGCTTTATCTCAATGAGATCTATCTCGGCCTCGGCAATTACGGCGTCGCCGCCTCCGCGTTGAATTA CTACGGTAAATCGGTGCATGAACTGAGCATTGCTCAGGCTGCCTATCTTGCCGCTCTGCCCAAGGCGCCGAATAATTATC ATCCCTTCCTCAAGCGCGATCGCGCGATCGAACGCCGCAATTGGGTCATCGATCGCATGGTCGATAATGGCTATGTCTCG CGCGCCGATGGCGAGAAGGCGAAGACCGAGCCGCTCGGCGTCAATCCGCGTGTCCTTTCTCCCAATGCCTATGCGGCGGG CTTCTTCGCCGAGGCGGTCAGGCGTGAACTCGGCGATCGTTACGGGGAAAAGAAACTCTATGAAGGCGGGCTTTCGGTCC GCACGACGCTCGATCCAAAAATGCAGCTCATGGCGCGCCGTGCGCTGGTCGATGGTCTCGTGCGCTACGACGAGGCTCAT GGATTCCGCGGCGCCATGCGCCATATTGACATCAGCCAGGATTGGGGCGTGGCGCTTGCCGAAATTCCGGTCTTGGGCGA TGTCGCGCCCTGGCGGCTCGCTGTCATCCTCGATGCATCGGATAATTATGCGCGCATAGGCTTGCAGCCGAAGCGGGAAA AATCCGGAGAAATCGCGCGCGAGCGGGAATCCGGAACGTTGGCGCCGGTCGGATTGCGTTGGACGCGCGGCCTTGGCGGG CGTGCCTCGCTGATCCCGGGCGACGTGGTTTACGTCGAACCCCTCGACGGCAAGCCTGGGCAGTTCAGGTTGCGGCAAAT CCCAGAGGTCGGCGGTGCCATTGTCGCGATGGACCCCTATACGGGCCGCGTCTTTGCCATGGTCGGTGGCTTTTCCTTCG ATCAGTCGGAATTCAACCGCGCGGTTCAGGCCATGCGCCAGCCGGGCTCCTCGTTCAAACCCTTTGTCTATGCGACAGCG CTGGACAATGGCTATACGCCGTCGTCGATCGTGCTCGATGCGCCGATCGAAATCGATCAAGGGCCTGGTCTTGGTGTCTG GCGGCCGGAAAATTTCGAAGGCCATTCGAGCGGCCCGCATACTTTGCGTTATGGCGTCGAACATTCGATCAACCAGATGA CCGTGCGTCTGGCGCGTGATGTCGGCATGCCGCTCATCGCCGAATATGCCAAGCGTTTCGGCATTTACGACGATCTGCCG CCGTTCCTGTCGATGTCGCTCGGCTCCGGCGAGACGACTTTGATGCGCATGACAACCGCCTATTCCATGCTGGCCAATGG CGGCAAAAGGATCAAATCGACCCTGATCGATCGCATTCAGGACCGCTACGGCCATACGCTCTATCGGCATGATGATCGTG TCTGCGAGGGCTGCGACGCCCAGAAATGGGCCAATCAGCCGGAACCGCGGTTGATCGACAAACGCGAGCAAGTGCTTGAT CCTCTGACTGCTTATCAGATCACCTCGATCATGGAAGGCGTGATTCAGCGCGGGACCGGACAGGTCATCAAGGAAGTCGG CAAACATCTGGCCGGCAAGACCGGAACGACCAATGAAGCGAAGGACCTTTGGTTCATCGGTTTCTCGCCCGACCTCGCGG TTGGCGTCTTCATGGGCTACGATCAGCCGCGTTCGCTGGGCGATTCCGCGCAGGCCGCGCAATATACGGCGCCGATCTTT CGGGATTTCATGAAAATGGCCCTGAAGGACAAGCCTGATGTGCCGTTTCGCGTGCCGCCTGGCATCAAGCTGATCTCGGT CAATGCCAAGTCAGGCTTGCGTTCCACCGGGGCTGGTTCCATCCTTGAGGCCTTCAAACCGGGCACCGCGCCGCCCGATA CTTATGCGGCGAGCGATTCCGCGCCGCGCGCGCAAACCGTCAATCCCGATGCTGACCGACTCGTCGGCACCGGTACTGGC GGTCTTTACTGA
Upstream 100 bases:
>100_bases TGTTTCAGCACGTTTCCTGCTTCCACCGGCTCATGGACGCCGGAGCCATTTCATCCAAGGCGCGGTCTCCCTTCACGCGC GTGATATCGAGGCTTGATTG
Downstream 100 bases:
>100_bases ACCTGGCGATCGCTGAGAAGGATCGCTGAACTGACCAACTCAACATTCCGCTGTTAGAGCATCGGACTTTCACATTGAAG CCAATCTGATGCTCTATCTT
Product: 1A family penicillin-binding protein
Products: NA
Alternate protein names: PBP-1a; PBP1a; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 803; Mature: 803
Protein sequence:
>803_residues MRLIARFFGFLFATAAILFVVGACAAGFLVWNFQRDLPDYTQLKNYEPPVMTRVHAADGSILAEYAHERRLYLPSTAIPP LIKQAFISAEDKNFYNHSGVDPEGILRAFMVLVEGGHHVQGASTITQQVAKNFLLTNERSFDRKIREALLAFRIEGAYSK ERILELYLNEIYLGLGNYGVAASALNYYGKSVHELSIAQAAYLAALPKAPNNYHPFLKRDRAIERRNWVIDRMVDNGYVS RADGEKAKTEPLGVNPRVLSPNAYAAGFFAEAVRRELGDRYGEKKLYEGGLSVRTTLDPKMQLMARRALVDGLVRYDEAH GFRGAMRHIDISQDWGVALAEIPVLGDVAPWRLAVILDASDNYARIGLQPKREKSGEIARERESGTLAPVGLRWTRGLGG RASLIPGDVVYVEPLDGKPGQFRLRQIPEVGGAIVAMDPYTGRVFAMVGGFSFDQSEFNRAVQAMRQPGSSFKPFVYATA LDNGYTPSSIVLDAPIEIDQGPGLGVWRPENFEGHSSGPHTLRYGVEHSINQMTVRLARDVGMPLIAEYAKRFGIYDDLP PFLSMSLGSGETTLMRMTTAYSMLANGGKRIKSTLIDRIQDRYGHTLYRHDDRVCEGCDAQKWANQPEPRLIDKREQVLD PLTAYQITSIMEGVIQRGTGQVIKEVGKHLAGKTGTTNEAKDLWFIGFSPDLAVGVFMGYDQPRSLGDSAQAAQYTAPIF RDFMKMALKDKPDVPFRVPPGIKLISVNAKSGLRSTGAGSILEAFKPGTAPPDTYAASDSAPRAQTVNPDADRLVGTGTG GLY
Sequences:
>Translated_803_residues MRLIARFFGFLFATAAILFVVGACAAGFLVWNFQRDLPDYTQLKNYEPPVMTRVHAADGSILAEYAHERRLYLPSTAIPP LIKQAFISAEDKNFYNHSGVDPEGILRAFMVLVEGGHHVQGASTITQQVAKNFLLTNERSFDRKIREALLAFRIEGAYSK ERILELYLNEIYLGLGNYGVAASALNYYGKSVHELSIAQAAYLAALPKAPNNYHPFLKRDRAIERRNWVIDRMVDNGYVS RADGEKAKTEPLGVNPRVLSPNAYAAGFFAEAVRRELGDRYGEKKLYEGGLSVRTTLDPKMQLMARRALVDGLVRYDEAH GFRGAMRHIDISQDWGVALAEIPVLGDVAPWRLAVILDASDNYARIGLQPKREKSGEIARERESGTLAPVGLRWTRGLGG RASLIPGDVVYVEPLDGKPGQFRLRQIPEVGGAIVAMDPYTGRVFAMVGGFSFDQSEFNRAVQAMRQPGSSFKPFVYATA LDNGYTPSSIVLDAPIEIDQGPGLGVWRPENFEGHSSGPHTLRYGVEHSINQMTVRLARDVGMPLIAEYAKRFGIYDDLP PFLSMSLGSGETTLMRMTTAYSMLANGGKRIKSTLIDRIQDRYGHTLYRHDDRVCEGCDAQKWANQPEPRLIDKREQVLD PLTAYQITSIMEGVIQRGTGQVIKEVGKHLAGKTGTTNEAKDLWFIGFSPDLAVGVFMGYDQPRSLGDSAQAAQYTAPIF RDFMKMALKDKPDVPFRVPPGIKLISVNAKSGLRSTGAGSILEAFKPGTAPPDTYAASDSAPRAQTVNPDADRLVGTGTG GLY >Mature_803_residues MRLIARFFGFLFATAAILFVVGACAAGFLVWNFQRDLPDYTQLKNYEPPVMTRVHAADGSILAEYAHERRLYLPSTAIPP LIKQAFISAEDKNFYNHSGVDPEGILRAFMVLVEGGHHVQGASTITQQVAKNFLLTNERSFDRKIREALLAFRIEGAYSK ERILELYLNEIYLGLGNYGVAASALNYYGKSVHELSIAQAAYLAALPKAPNNYHPFLKRDRAIERRNWVIDRMVDNGYVS RADGEKAKTEPLGVNPRVLSPNAYAAGFFAEAVRRELGDRYGEKKLYEGGLSVRTTLDPKMQLMARRALVDGLVRYDEAH GFRGAMRHIDISQDWGVALAEIPVLGDVAPWRLAVILDASDNYARIGLQPKREKSGEIARERESGTLAPVGLRWTRGLGG RASLIPGDVVYVEPLDGKPGQFRLRQIPEVGGAIVAMDPYTGRVFAMVGGFSFDQSEFNRAVQAMRQPGSSFKPFVYATA LDNGYTPSSIVLDAPIEIDQGPGLGVWRPENFEGHSSGPHTLRYGVEHSINQMTVRLARDVGMPLIAEYAKRFGIYDDLP PFLSMSLGSGETTLMRMTTAYSMLANGGKRIKSTLIDRIQDRYGHTLYRHDDRVCEGCDAQKWANQPEPRLIDKREQVLD PLTAYQITSIMEGVIQRGTGQVIKEVGKHLAGKTGTTNEAKDLWFIGFSPDLAVGVFMGYDQPRSLGDSAQAAQYTAPIF RDFMKMALKDKPDVPFRVPPGIKLISVNAKSGLRSTGAGSILEAFKPGTAPPDTYAASDSAPRAQTVNPDADRLVGTGTG GLY
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG5009
COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI87082258, Length=857, Percent_Identity=32.9054842473746, Blast_Score=429, Evalue=1e-121, Organism=Escherichia coli, GI1786343, Length=273, Percent_Identity=35.8974358974359, Blast_Score=160, Evalue=3e-40, Organism=Escherichia coli, GI1788867, Length=252, Percent_Identity=34.1269841269841, Blast_Score=116, Evalue=5e-27, Organism=Escherichia coli, GI1789601, Length=166, Percent_Identity=36.144578313253, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.2.-; 3.4.-.-
Molecular weight: Translated: 88500; Mature: 88500
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIARFFGFLFATAAILFVVGACAAGFLVWNFQRDLPDYTQLKNYEPPVMTRVHAADGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHCCCCCCHHEEEECCCCH ILAEYAHERRLYLPSTAIPPLIKQAFISAEDKNFYNHSGVDPEGILRAFMVLVEGGHHVQ HHHHHHHHCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC GASTITQQVAKNFLLTNERSFDRKIREALLAFRIEGAYSKERILELYLNEIYLGLGNYGV CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCH AASALNYYGKSVHELSIAQAAYLAALPKAPNNYHPFLKRDRAIERRNWVIDRMVDNGYVS HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE RADGEKAKTEPLGVNPRVLSPNAYAAGFFAEAVRRELGDRYGEKKLYEGGLSVRTTLDPK CCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCHH MQLMARRALVDGLVRYDEAHGFRGAMRHIDISQDWGVALAEIPVLGDVAPWRLAVILDAS HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEECC DNYARIGLQPKREKSGEIARERESGTLAPVGLRWTRGLGGRASLIPGDVVYVEPLDGKPG CCEEEECCCCCCCCCCCHHHHHCCCCCCEECCHHHCCCCCCCCCCCCCEEEEECCCCCCC QFRLRQIPEVGGAIVAMDPYTGRVFAMVGGFSFDQSEFNRAVQAMRQPGSSFKPFVYATA CHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE LDNGYTPSSIVLDAPIEIDQGPGLGVWRPENFEGHSSGPHTLRYGVEHSINQMTVRLARD CCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHH VGMPLIAEYAKRFGIYDDLPPFLSMSLGSGETTLMRMTTAYSMLANGGKRIKSTLIDRIQ CCCHHHHHHHHHCCCCCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH DRYGHTLYRHDDRVCEGCDAQKWANQPEPRLIDKREQVLDPLTAYQITSIMEGVIQRGTG HHHCCCHHCCCCHHHCCCCCHHHCCCCCCCHHCCHHHHHCHHHHHHHHHHHHHHHHCCHH QVIKEVGKHLAGKTGTTNEAKDLWFIGFSPDLAVGVFMGYDQPRSLGDSAQAAQYTAPIF HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHEEEEECCCCCCCCCCCHHHHHHHHHHH RDFMKMALKDKPDVPFRVPPGIKLISVNAKSGLRSTGAGSILEAFKPGTAPPDTYAASDS HHHHHHHHCCCCCCCEECCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC APRAQTVNPDADRLVGTGTGGLY CCCCCCCCCCHHHEEECCCCCCC >Mature Secondary Structure MRLIARFFGFLFATAAILFVVGACAAGFLVWNFQRDLPDYTQLKNYEPPVMTRVHAADGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHCCCCCCHHEEEECCCCH ILAEYAHERRLYLPSTAIPPLIKQAFISAEDKNFYNHSGVDPEGILRAFMVLVEGGHHVQ HHHHHHHHCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC GASTITQQVAKNFLLTNERSFDRKIREALLAFRIEGAYSKERILELYLNEIYLGLGNYGV CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCH AASALNYYGKSVHELSIAQAAYLAALPKAPNNYHPFLKRDRAIERRNWVIDRMVDNGYVS HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE RADGEKAKTEPLGVNPRVLSPNAYAAGFFAEAVRRELGDRYGEKKLYEGGLSVRTTLDPK CCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEECCHH MQLMARRALVDGLVRYDEAHGFRGAMRHIDISQDWGVALAEIPVLGDVAPWRLAVILDAS HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEECC DNYARIGLQPKREKSGEIARERESGTLAPVGLRWTRGLGGRASLIPGDVVYVEPLDGKPG CCEEEECCCCCCCCCCCHHHHHCCCCCCEECCHHHCCCCCCCCCCCCCEEEEECCCCCCC QFRLRQIPEVGGAIVAMDPYTGRVFAMVGGFSFDQSEFNRAVQAMRQPGSSFKPFVYATA CHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE LDNGYTPSSIVLDAPIEIDQGPGLGVWRPENFEGHSSGPHTLRYGVEHSINQMTVRLARD CCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHH VGMPLIAEYAKRFGIYDDLPPFLSMSLGSGETTLMRMTTAYSMLANGGKRIKSTLIDRIQ CCCHHHHHHHHHCCCCCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH DRYGHTLYRHDDRVCEGCDAQKWANQPEPRLIDKREQVLDPLTAYQITSIMEGVIQRGTG HHHCCCHHCCCCHHHCCCCCHHHCCCCCCCHHCCHHHHHCHHHHHHHHHHHHHHHHCCHH QVIKEVGKHLAGKTGTTNEAKDLWFIGFSPDLAVGVFMGYDQPRSLGDSAQAAQYTAPIF HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHEEEEECCCCCCCCCCCHHHHHHHHHHH RDFMKMALKDKPDVPFRVPPGIKLISVNAKSGLRSTGAGSILEAFKPGTAPPDTYAASDS HHHHHHHHCCCCCCCEECCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC APRAQTVNPDADRLVGTGTGGLY CCCCCCCCCCHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA