| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677906
Identifier: 182677906
GI number: 182677906
Start: 1045807
End: 1047816
Strand: Direct
Name: 182677906
Synonym: Bind_0914
Alternate gene names: NA
Gene position: 1045807-1047816 (Clockwise)
Preceding gene: 182677903
Following gene: 182677907
Centisome position: 25.08
GC content: 60.45
Gene sequence:
>2010_bases GTGGGAGGTTTCGTGGAAAAGCAGAGTTTACGCTTCTCCCTGGCACCTGAAAGGGATGTCACAGCCGGTGAAGATGGGTT TGTGGCTTTGTCCGCGCAGCCCTGGCTGATCATCGAGGCTTGGGGAGCCTTCGCCCCGGGTGCTTTTGTCGAAATCATCT ATACTGCGAGCCTGTGGGATGTGCCGGTCCGTCCCGTCTTTCGCTTTCGCTCGGGCTCTGGCTCCTATACCGACCAGATC GCGCCAGGACCCGTCGCGGGCAAGGGGGTGTGGCGCGGTTTTGTACCCGCCGATTGCACGGCGATCAGCGTCAGCCCAAC CAATCGGCCCGGGCGGTTCGATTTCGCCATTCTCTCTCTCCGGCGTGTTTCCACGAGCGAAATGGCCCGTTTGGCTTTTG TGCGCGATCGCAACAGAACGCGCGCGGCCTTGCTGCGGCTTCTGCAGGGCAAAAGGCGGGAAGCCGCGCGGCTTCTTGAA CAGGCCGTCGCGGGCGTGCCTCTTGCGGATTCGCTTGCGTGGGTCGCGGAACGGACGCGGCCGACTGATCTTACCGCGAT CGACCGGCCGCGTTCCGATTGGCACCAGGGACCGTGGATTCATATCCTTCTGAGCGGGCAAGGCGCCGGGAAACAGGCAC TGAAAATAACGATCGAGGCCCTTCAAGCACAAATTTATCCGCGCTGGACCTTGATCCTTCCAACCGAAGAATTGGCGGCG GATGCCCGTGCGTTTTGCGACGATGAACATGTGCGTTACCAGCCGGCCGGGACGATCGCCGAATATGTGATGGGATTGCC CGGGACTGATCTCGTGGCGGAGGTCGATGCTGGTGATCGATGGCGCGCATGGGGTCTTGCCTGTCTGGCGGAAGCCGCGA TGCGCTACCCCGAGAAAACGCTCTTTTACGGAGACGAGGAAACCGTTGTTGGCCGAATTTTGCTGAAACCCGGTTGGAGC CCGGATTTCTTTCAGGCTGGCGCCTTTCTCGGCAAGGCTTTCGCGGTGCGGATCGAAGCCGTGAAAAGCGATGGGGCGGC ACCCGCGGCATCTGTCTTATCCGCGGCGCGGCTCGCGGCCCTGCCGCCAGGCGAGGTTTTGCCGCTCCACCGTGTTCTGC TCAAACGGCGCGAAGGTGGTCCGAACGCGGGGATGGTGACACCGCCTGTAAGTCCGTCCCCATCGCGATCGAGCGAGATC AATCCTTCGGCCATGATCATTCTGCCGATCCGTGATGGCGCCGAAAAACTCGGACGCAGCATCGCCAGTATTTATGAACG CACACGCTTTGATAATTATTCGATCCTCATCGTCGATGATGATAGTGTCGAGGAAGACACCAAACATCTTTTCAAATTGA TCAAGAACGACCGGCTTATTTCAGTTTTGCACAATCCGGGCGGGGTCGGTCTTGGGGCTCTCTGCAATGCCGCCACGGCG CGGCGCCGCGCCGATATGATTGTGTTTCTCGACAATGGCGTCGAAATTCTCAGTGAAGATTGGCTCGATCGCTTGCTGGC TCTTGCCATGCGCTCAGAAATCGGGGCGGTCGGGGTCCGTATGCTCGATTCGCGCGGCGCGATCCTGCCCTCCGCTTTCG TGCTTGGCTCTGGCGATGATGGGGGGGAACCCCGCAGCGATATAATTGTGGCGGATAGTCCCGAGGCAGAGCTTTGGCGC GAGCGTGACAGTCTCTTGCATGAAGTGGCGGCTGTGGGCGGCGGCTGCCTCGCCATAGCCCGGCGCAAATTCTTGTTGCT CGGCGGTTTTGCTGCCGAACCCGTCTTGCCTCCATCCTTGCTCGATCAGGATCTTTGTTTGCGACTTGCGGCGCATGGTC AAAGATCCTGTATCGAGCCGTCGGTCAGGCTGCGGCGCGACGCGCCTCGGCCCTCTGCCGGTGAAGCGGGCGCGGAATGG TTCGCGCAACAATGGTTCGACCGTTTGCGTGACGATCCTTGTTTTCATCCGGGATTCGCGCTGCGAAGCGGAGCCCTTTC CCTGGGATGA
Upstream 100 bases:
>100_bases GCTTCGAAACGGGCCGAGTGACGGATGCGACGAGCGAAGCTTTTCCGCCTTGTTGGCCGAAAGCGTGTATGGAAGAGAAA ATCCCGTGTGGAGATGGGTC
Downstream 100 bases:
>100_bases TGATGTGAGCCGCGCGGATTCGTTGCGCCACCATGAAAAGCTTGTTTTCACTCAAGGAGGGGACTAAGCCTCATCCTACT TGTTTCTCCTGTGGGTTTGA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 669; Mature: 668
Protein sequence:
>669_residues MGGFVEKQSLRFSLAPERDVTAGEDGFVALSAQPWLIIEAWGAFAPGAFVEIIYTASLWDVPVRPVFRFRSGSGSYTDQI APGPVAGKGVWRGFVPADCTAISVSPTNRPGRFDFAILSLRRVSTSEMARLAFVRDRNRTRAALLRLLQGKRREAARLLE QAVAGVPLADSLAWVAERTRPTDLTAIDRPRSDWHQGPWIHILLSGQGAGKQALKITIEALQAQIYPRWTLILPTEELAA DARAFCDDEHVRYQPAGTIAEYVMGLPGTDLVAEVDAGDRWRAWGLACLAEAAMRYPEKTLFYGDEETVVGRILLKPGWS PDFFQAGAFLGKAFAVRIEAVKSDGAAPAASVLSAARLAALPPGEVLPLHRVLLKRREGGPNAGMVTPPVSPSPSRSSEI NPSAMIILPIRDGAEKLGRSIASIYERTRFDNYSILIVDDDSVEEDTKHLFKLIKNDRLISVLHNPGGVGLGALCNAATA RRRADMIVFLDNGVEILSEDWLDRLLALAMRSEIGAVGVRMLDSRGAILPSAFVLGSGDDGGEPRSDIIVADSPEAELWR ERDSLLHEVAAVGGGCLAIARRKFLLLGGFAAEPVLPPSLLDQDLCLRLAAHGQRSCIEPSVRLRRDAPRPSAGEAGAEW FAQQWFDRLRDDPCFHPGFALRSGALSLG
Sequences:
>Translated_669_residues MGGFVEKQSLRFSLAPERDVTAGEDGFVALSAQPWLIIEAWGAFAPGAFVEIIYTASLWDVPVRPVFRFRSGSGSYTDQI APGPVAGKGVWRGFVPADCTAISVSPTNRPGRFDFAILSLRRVSTSEMARLAFVRDRNRTRAALLRLLQGKRREAARLLE QAVAGVPLADSLAWVAERTRPTDLTAIDRPRSDWHQGPWIHILLSGQGAGKQALKITIEALQAQIYPRWTLILPTEELAA DARAFCDDEHVRYQPAGTIAEYVMGLPGTDLVAEVDAGDRWRAWGLACLAEAAMRYPEKTLFYGDEETVVGRILLKPGWS PDFFQAGAFLGKAFAVRIEAVKSDGAAPAASVLSAARLAALPPGEVLPLHRVLLKRREGGPNAGMVTPPVSPSPSRSSEI NPSAMIILPIRDGAEKLGRSIASIYERTRFDNYSILIVDDDSVEEDTKHLFKLIKNDRLISVLHNPGGVGLGALCNAATA RRRADMIVFLDNGVEILSEDWLDRLLALAMRSEIGAVGVRMLDSRGAILPSAFVLGSGDDGGEPRSDIIVADSPEAELWR ERDSLLHEVAAVGGGCLAIARRKFLLLGGFAAEPVLPPSLLDQDLCLRLAAHGQRSCIEPSVRLRRDAPRPSAGEAGAEW FAQQWFDRLRDDPCFHPGFALRSGALSLG >Mature_668_residues GGFVEKQSLRFSLAPERDVTAGEDGFVALSAQPWLIIEAWGAFAPGAFVEIIYTASLWDVPVRPVFRFRSGSGSYTDQIA PGPVAGKGVWRGFVPADCTAISVSPTNRPGRFDFAILSLRRVSTSEMARLAFVRDRNRTRAALLRLLQGKRREAARLLEQ AVAGVPLADSLAWVAERTRPTDLTAIDRPRSDWHQGPWIHILLSGQGAGKQALKITIEALQAQIYPRWTLILPTEELAAD ARAFCDDEHVRYQPAGTIAEYVMGLPGTDLVAEVDAGDRWRAWGLACLAEAAMRYPEKTLFYGDEETVVGRILLKPGWSP DFFQAGAFLGKAFAVRIEAVKSDGAAPAASVLSAARLAALPPGEVLPLHRVLLKRREGGPNAGMVTPPVSPSPSRSSEIN PSAMIILPIRDGAEKLGRSIASIYERTRFDNYSILIVDDDSVEEDTKHLFKLIKNDRLISVLHNPGGVGLGALCNAATAR RRADMIVFLDNGVEILSEDWLDRLLALAMRSEIGAVGVRMLDSRGAILPSAFVLGSGDDGGEPRSDIIVADSPEAELWRE RDSLLHEVAAVGGGCLAIARRKFLLLGGFAAEPVLPPSLLDQDLCLRLAAHGQRSCIEPSVRLRRDAPRPSAGEAGAEWF AQQWFDRLRDDPCFHPGFALRSGALSLG
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 72650; Mature: 72519
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGFVEKQSLRFSLAPERDVTAGEDGFVALSAQPWLIIEAWGAFAPGAFVEIIYTASLWD CCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCCCC VPVRPVFRFRSGSGSYTDQIAPGPVAGKGVWRGFVPADCTAISVSPTNRPGRFDFAILSL CCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEHEEHHH RRVSTSEMARLAFVRDRNRTRAALLRLLQGKRREAARLLEQAVAGVPLADSLAWVAERTR HHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCC PTDLTAIDRPRSDWHQGPWIHILLSGQGAGKQALKITIEALQAQIYPRWTLILPTEELAA CCCCCCCCCCCHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHH DARAFCDDEHVRYQPAGTIAEYVMGLPGTDLVAEVDAGDRWRAWGLACLAEAAMRYPEKT HHHHHCCCCCEEECCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCE LFYGDEETVVGRILLKPGWSPDFFQAGAFLGKAFAVRIEAVKSDGAAPAASVLSAARLAA EEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHC LPPGEVLPLHRVLLKRREGGPNAGMVTPPVSPSPSRSSEINPSAMIILPIRDGAEKLGRS CCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH IASIYERTRFDNYSILIVDDDSVEEDTKHLFKLIKNDRLISVLHNPGGVGLGALCNAATA HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH RRRADMIVFLDNGVEILSEDWLDRLLALAMRSEIGAVGVRMLDSRGAILPSAFVLGSGDD HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCC GGEPRSDIIVADSPEAELWRERDSLLHEVAAVGGGCLAIARRKFLLLGGFAAEPVLPPSL CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCCCHHH LDQDLCLRLAAHGQRSCIEPSVRLRRDAPRPSAGEAGAEWFAQQWFDRLRDDPCFHPGFA CCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHH LRSGALSLG HHCCCCCCC >Mature Secondary Structure GGFVEKQSLRFSLAPERDVTAGEDGFVALSAQPWLIIEAWGAFAPGAFVEIIYTASLWD CCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCCCC VPVRPVFRFRSGSGSYTDQIAPGPVAGKGVWRGFVPADCTAISVSPTNRPGRFDFAILSL CCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEHEEHHH RRVSTSEMARLAFVRDRNRTRAALLRLLQGKRREAARLLEQAVAGVPLADSLAWVAERTR HHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCC PTDLTAIDRPRSDWHQGPWIHILLSGQGAGKQALKITIEALQAQIYPRWTLILPTEELAA CCCCCCCCCCCHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHH DARAFCDDEHVRYQPAGTIAEYVMGLPGTDLVAEVDAGDRWRAWGLACLAEAAMRYPEKT HHHHHCCCCCEEECCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCE LFYGDEETVVGRILLKPGWSPDFFQAGAFLGKAFAVRIEAVKSDGAAPAASVLSAARLAA EEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHC LPPGEVLPLHRVLLKRREGGPNAGMVTPPVSPSPSRSSEINPSAMIILPIRDGAEKLGRS CCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH IASIYERTRFDNYSILIVDDDSVEEDTKHLFKLIKNDRLISVLHNPGGVGLGALCNAATA HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH RRRADMIVFLDNGVEILSEDWLDRLLALAMRSEIGAVGVRMLDSRGAILPSAFVLGSGDD HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCC GGEPRSDIIVADSPEAELWRERDSLLHEVAAVGGGCLAIARRKFLLLGGFAAEPVLPPSL CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCCCHHH LDQDLCLRLAAHGQRSCIEPSVRLRRDAPRPSAGEAGAEWFAQQWFDRLRDDPCFHPGFA CCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHH LRSGALSLG HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]