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The map label for this gene is rpiA [H]

Identifier: 182677872

GI number: 182677872

Start: 1001735

End: 1002445

Strand: Direct

Name: rpiA [H]

Synonym: Bind_0879

Alternate gene names: 182677872

Gene position: 1001735-1002445 (Clockwise)

Preceding gene: 182677871

Following gene: 182677873

Centisome position: 24.02

GC content: 58.93

Gene sequence:

>711_bases
ATGGCCCTTCTTAATCCCGACGAAGCCAAGCGTCTTGCCGCCGCCAAGGCCTTGGAACTGGTGAAACCCGGCATGCGTCT
CGGTCTTGGCACCGGCACCACGGCGGCGCATTTCGTGGATCTGCTTGGCGCCAAGGTCGCCGAGGGCCTTGATGTGCTCT
GTGTCCCGACATCGGAGCGCACGCGCACCCAGGCGGACACTTACAAGATTCCCTTGTCGACGCTCGATGCGACCCCTGAG
CTCGACCTGACAATTGATGGGGCGGATGAATTTGATCCGCAATTACGCCTCATTAAAGGAGGTGGCGGCGCGCATCTGCG
GGAGAAAATGGTCGCCGCAGCCTCGAAACGCATGGTGGTCATTACTGATGCCTCCAAGGCGGTTCAGACGCTCGGCAAAT
TTCCCTTGCCGATCGAGATCAATGTGTTTGGCGCCGAGGCGACGCGACTCATGATCATTCGCGCGGCTGCGGCCTGCGGT
TGCCAGGGGGACGTCAAACTGCGCCGCATTCCGAGCGGCGGTCCCTATGTGACCGACAATGGCCATTATATTGTCGATGC
TTCGTTTGGTGCGATTCCTGATCCCGAAAAGCTCTCTACGGCGCTGCTCGAGATTCCTGGGGTCATCGAACATGGGCTTT
TTATCGGTCTCGCCAAGGCGGTTATTTGCGCGGGGTCGGAAGGCATCGAGATTTTTGGCCAACTCGATTGA

Upstream 100 bases:

>100_bases
CTCCTTCGTTGACCAGTCGTTTTGCATAACGCTCTGGAATCTCGCATCACGTCCTCCCGCCGATTTCCTCCCTTTCCCTC
CACCACTTCCAAGAGCAGCC

Downstream 100 bases:

>100_bases
GGCATGATGTTTTTCAACCGGCGTCCGCATTTCCTCGCATCTCCCTTCCTCGTCTTTGCCCTGGTCGTTTCTCCTCTTTT
CATGGGGGGGAGCGGGAACG

Product: ribose 5-phosphate isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MALLNPDEAKRLAAAKALELVKPGMRLGLGTGTTAAHFVDLLGAKVAEGLDVLCVPTSERTRTQADTYKIPLSTLDATPE
LDLTIDGADEFDPQLRLIKGGGGAHLREKMVAAASKRMVVITDASKAVQTLGKFPLPIEINVFGAEATRLMIIRAAAACG
CQGDVKLRRIPSGGPYVTDNGHYIVDASFGAIPDPEKLSTALLEIPGVIEHGLFIGLAKAVICAGSEGIEIFGQLD

Sequences:

>Translated_236_residues
MALLNPDEAKRLAAAKALELVKPGMRLGLGTGTTAAHFVDLLGAKVAEGLDVLCVPTSERTRTQADTYKIPLSTLDATPE
LDLTIDGADEFDPQLRLIKGGGGAHLREKMVAAASKRMVVITDASKAVQTLGKFPLPIEINVFGAEATRLMIIRAAAACG
CQGDVKLRRIPSGGPYVTDNGHYIVDASFGAIPDPEKLSTALLEIPGVIEHGLFIGLAKAVICAGSEGIEIFGQLD
>Mature_235_residues
ALLNPDEAKRLAAAKALELVKPGMRLGLGTGTTAAHFVDLLGAKVAEGLDVLCVPTSERTRTQADTYKIPLSTLDATPEL
DLTIDGADEFDPQLRLIKGGGGAHLREKMVAAASKRMVVITDASKAVQTLGKFPLPIEINVFGAEATRLMIIRAAAACGC
QGDVKLRRIPSGGPYVTDNGHYIVDASFGAIPDPEKLSTALLEIPGVIEHGLFIGLAKAVICAGSEGIEIFGQLD

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=228, Percent_Identity=39.0350877192982, Blast_Score=140, Evalue=1e-33,
Organism=Escherichia coli, GI1789280, Length=211, Percent_Identity=36.0189573459716, Blast_Score=126, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17551758, Length=227, Percent_Identity=40.0881057268723, Blast_Score=139, Evalue=8e-34,
Organism=Saccharomyces cerevisiae, GI6324669, Length=239, Percent_Identity=30.9623430962343, Blast_Score=114, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281364072, Length=200, Percent_Identity=36.5, Blast_Score=120, Evalue=8e-28,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 24741; Mature: 24610

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLNPDEAKRLAAAKALELVKPGMRLGLGTGTTAAHFVDLLGAKVAEGLDVLCVPTSER
CCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCC
TRTQADTYKIPLSTLDATPELDLTIDGADEFDPQLRLIKGGGGAHLREKMVAAASKRMVV
CCCCCCEEEECHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEE
ITDASKAVQTLGKFPLPIEINVFGAEATRLMIIRAAAACGCQGDVKLRRIPSGGPYVTDN
EECCHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEHHHCCCCCCEEEEECCCCCCEEECC
GHYIVDASFGAIPDPEKLSTALLEIPGVIEHGLFIGLAKAVICAGSEGIEIFGQLD
CCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure 
ALLNPDEAKRLAAAKALELVKPGMRLGLGTGTTAAHFVDLLGAKVAEGLDVLCVPTSER
CCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCC
TRTQADTYKIPLSTLDATPELDLTIDGADEFDPQLRLIKGGGGAHLREKMVAAASKRMVV
CCCCCCEEEECHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEE
ITDASKAVQTLGKFPLPIEINVFGAEATRLMIIRAAAACGCQGDVKLRRIPSGGPYVTDN
EECCHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEHHHCCCCCCEEEEECCCCCCEEECC
GHYIVDASFGAIPDPEKLSTALLEIPGVIEHGLFIGLAKAVICAGSEGIEIFGQLD
CCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA