Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182677871

Identifier: 182677871

GI number: 182677871

Start: 1001156

End: 1001569

Strand: Direct

Name: 182677871

Synonym: Bind_0878

Alternate gene names: NA

Gene position: 1001156-1001569 (Clockwise)

Preceding gene: 182677866

Following gene: 182677872

Centisome position: 24.01

GC content: 59.9

Gene sequence:

>414_bases
ATGAGATTTTTTGCTTTTCGGCTTTCAGGGGGCCTTTCGCCCTGGGCAATTGCCATGGGTTTGGCTTCCATGAGCTTGAC
CTTGGTTGGGGCCTTCTCGCCGGTGCGCGCGGCCAATTATGAGTTTCTGGCGGCTCCGGACATTGCCTTGAACCGGGTCT
ATCGCCTTGATCGGGCCAGCGGCGAGGTCGGCGCCTGCCAATATGGCTTGAGCGAGGGGGAAGGGGCGGTGGGCGTCACG
CTGTGTTATCCCCCGGGCCAAGGCGCCGGCTCGCAGGCCTCGAGCGAATATTCGCTGATCGCATCCCATCATGAAAAAGA
AGGCGGCGTGTTTCGCGTTGATCTGCGCACGGGCATGATGTCGATCTGCTACGTCCTGAACGAAGTGGTCGTTTGCACCG
CGCAAGCGAAATGA

Upstream 100 bases:

>100_bases
CTTCAAAAAAAGCAAAATCAATCGGGGCTTTGGCCACGCAAGGCTGCTTAGCATTGGTGGTGGATGAACCGTTGAACGAG
GCACGCTGGAATTGCAGGGC

Downstream 100 bases:

>100_bases
GCGGTTCTGATAGTAGTCCCGGGCGGGGGCGGGACTTGACGGAAACGGGGTTCAGGCGCAAATGCCTCCTTCGTTGACCA
GTCGTTTTGCATAACGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MRFFAFRLSGGLSPWAIAMGLASMSLTLVGAFSPVRAANYEFLAAPDIALNRVYRLDRASGEVGACQYGLSEGEGAVGVT
LCYPPGQGAGSQASSEYSLIASHHEKEGGVFRVDLRTGMMSICYVLNEVVVCTAQAK

Sequences:

>Translated_137_residues
MRFFAFRLSGGLSPWAIAMGLASMSLTLVGAFSPVRAANYEFLAAPDIALNRVYRLDRASGEVGACQYGLSEGEGAVGVT
LCYPPGQGAGSQASSEYSLIASHHEKEGGVFRVDLRTGMMSICYVLNEVVVCTAQAK
>Mature_137_residues
MRFFAFRLSGGLSPWAIAMGLASMSLTLVGAFSPVRAANYEFLAAPDIALNRVYRLDRASGEVGACQYGLSEGEGAVGVT
LCYPPGQGAGSQASSEYSLIASHHEKEGGVFRVDLRTGMMSICYVLNEVVVCTAQAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14476; Mature: 14476

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFFAFRLSGGLSPWAIAMGLASMSLTLVGAFSPVRAANYEFLAAPDIALNRVYRLDRAS
CEEEEEEECCCCCHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCC
GEVGACQYGLSEGEGAVGVTLCYPPGQGAGSQASSEYSLIASHHEKEGGVFRVDLRTGMM
CCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHH
SICYVLNEVVVCTAQAK
HHHHHHHHHEEEEECCC
>Mature Secondary Structure
MRFFAFRLSGGLSPWAIAMGLASMSLTLVGAFSPVRAANYEFLAAPDIALNRVYRLDRAS
CEEEEEEECCCCCHHHHHHHHHHHEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCC
GEVGACQYGLSEGEGAVGVTLCYPPGQGAGSQASSEYSLIASHHEKEGGVFRVDLRTGMM
CCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHH
SICYVLNEVVVCTAQAK
HHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA