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The map label for this gene is lpsB [H]

Identifier: 182677834

GI number: 182677834

Start: 943432

End: 944583

Strand: Direct

Name: lpsB [H]

Synonym: Bind_0841

Alternate gene names: 182677834

Gene position: 943432-944583 (Clockwise)

Preceding gene: 182677833

Following gene: 182677835

Centisome position: 22.62

GC content: 55.64

Gene sequence:

>1152_bases
ATGCAAAAGACAATTCTTTTCATCAGCCATACCGGCCAGATAGGCGGTGCGGAAGTCGTTCTCCTCAGCATGGCGCAACA
TTATCGCGACCGCTGTCATGTCATTTTGCTTGCCGATGGTCCGTTGCGCCAGAAACTGAGCGATTGCGGCGTATCCGTCG
ATGTCATCGCGGGCAGGGATTCCATGCTGAAGGTCTCGCGCCAAGGTGGCAGGCTGGAGGTGATCCGCGCCGCGCCGGCC
GCGTTGGCTTTGGCATGGCGCCTGGCCCGTGTCGCGCGGCATTACGACATCCTCTTTCCCAACTCGCAAAAGGCCGCAGT
CATTACCATGTTGACAGGGGCGATCCTGCGTAAGCCTGTCGTCTGGTATCTCCATGATATTCTGTCATCGGCTCATTTCA
GCGCTTTGCAGCGTCGCCTCGTCGTCACCTTGGCTAATCATATGGCGTCTTGGATCTTGACCAATTCGCAGGTCAGCCGT
GATGCTTTCATTGCCTGTGGCGGTAAGGCAAACCATATTTCCGTGGCTCCGTGCGGTGTTGATGCGGCTCCGTTCGACAT
GATCTCGGACAAAGAAATCAACGCGGCCAAACAGGCCTTGGGGGTCGGTAACCACCCCCTGGTTGGTCTATTTGGACGGA
TAACACCGTGGAAGGGTCAACACGTCCTGATCGAAGCCCTGACACGATTGCCGGATGTCCACGCCTTGATCGTTGGCGAT
GCCTTGTTTGGGGAGGACGCCTACCGACAGGAGCTTCAGACTTTGGTGGCAACTCATGGCTTGACAGATCGGGTTCACTG
GTTGGGCTTTCGTCAGGATATCCCCCTGTTGATGCGAACAGTTGATATGATCGTTCATTGCTCGACCGCTCCCGAGCCTT
ATGGCCTCGTCATCGTCGAGGGAATGTTGGCATGCCGTCCCGTTATCGCGGCTGATGGTGGCGCTTCGCGGGAATTATTG
GGAGAGGATTATCCTTATCTTGCCGCTCCAGGAGACTCAGAGGCGCTCGCCAAGAAGATCGCGACGCTTCAGTCCCTTAA
TACGGAAGAGAGGGAGAGCCTTGTGGCGGCTAATTCGAAACGAGCACGGGCTTTATTTTCCAAGGAGCGTATGCTCACTG
ATATTGACCAAGCTCTTCAGCATATAGGTTGA

Upstream 100 bases:

>100_bases
TACGGCTTCCTTCAGTGGAGGCCTGCGAGGCCTATGCCGCACGCTTCGGTTTGCCGCGGATGGCGGCTGAGACGGCTGCT
GTCTATCGGGAATGCATCTG

Downstream 100 bases:

>100_bases
TGCAACAATGCGACGTCAAGCATCGGCATCTCAGCGACTGTTGAGCAAGCTGCATCCAAACAGTGTCATCGCGCTTAAAC
AAGCTTTGATGGTCACTGCT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MQKTILFISHTGQIGGAEVVLLSMAQHYRDRCHVILLADGPLRQKLSDCGVSVDVIAGRDSMLKVSRQGGRLEVIRAAPA
ALALAWRLARVARHYDILFPNSQKAAVITMLTGAILRKPVVWYLHDILSSAHFSALQRRLVVTLANHMASWILTNSQVSR
DAFIACGGKANHISVAPCGVDAAPFDMISDKEINAAKQALGVGNHPLVGLFGRITPWKGQHVLIEALTRLPDVHALIVGD
ALFGEDAYRQELQTLVATHGLTDRVHWLGFRQDIPLLMRTVDMIVHCSTAPEPYGLVIVEGMLACRPVIAADGGASRELL
GEDYPYLAAPGDSEALAKKIATLQSLNTEERESLVAANSKRARALFSKERMLTDIDQALQHIG

Sequences:

>Translated_383_residues
MQKTILFISHTGQIGGAEVVLLSMAQHYRDRCHVILLADGPLRQKLSDCGVSVDVIAGRDSMLKVSRQGGRLEVIRAAPA
ALALAWRLARVARHYDILFPNSQKAAVITMLTGAILRKPVVWYLHDILSSAHFSALQRRLVVTLANHMASWILTNSQVSR
DAFIACGGKANHISVAPCGVDAAPFDMISDKEINAAKQALGVGNHPLVGLFGRITPWKGQHVLIEALTRLPDVHALIVGD
ALFGEDAYRQELQTLVATHGLTDRVHWLGFRQDIPLLMRTVDMIVHCSTAPEPYGLVIVEGMLACRPVIAADGGASRELL
GEDYPYLAAPGDSEALAKKIATLQSLNTEERESLVAANSKRARALFSKERMLTDIDQALQHIG
>Mature_383_residues
MQKTILFISHTGQIGGAEVVLLSMAQHYRDRCHVILLADGPLRQKLSDCGVSVDVIAGRDSMLKVSRQGGRLEVIRAAPA
ALALAWRLARVARHYDILFPNSQKAAVITMLTGAILRKPVVWYLHDILSSAHFSALQRRLVVTLANHMASWILTNSQVSR
DAFIACGGKANHISVAPCGVDAAPFDMISDKEINAAKQALGVGNHPLVGLFGRITPWKGQHVLIEALTRLPDVHALIVGD
ALFGEDAYRQELQTLVATHGLTDRVHWLGFRQDIPLLMRTVDMIVHCSTAPEPYGLVIVEGMLACRPVIAADGGASRELL
GEDYPYLAAPGDSEALAKKIATLQSLNTEERESLVAANSKRARALFSKERMLTDIDQALQHIG

Specific function: Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41684; Mature: 41684

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTILFISHTGQIGGAEVVLLSMAQHYRDRCHVILLADGPLRQKLSDCGVSVDVIAGRD
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCEEEEEECCC
SMLKVSRQGGRLEVIRAAPAALALAWRLARVARHYDILFPNSQKAAVITMLTGAILRKPV
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCH
VWYLHDILSSAHFSALQRRLVVTLANHMASWILTNSQVSRDAFIACGGKANHISVAPCGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCC
DAAPFDMISDKEINAAKQALGVGNHPLVGLFGRITPWKGQHVLIEALTRLPDVHALIVGD
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEEC
ALFGEDAYRQELQTLVATHGLTDRVHWLGFRQDIPLLMRTVDMIVHCSTAPEPYGLVIVE
HHHCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHEECCCCCCCCCEEEEE
GMLACRPVIAADGGASRELLGEDYPYLAAPGDSEALAKKIATLQSLNTEERESLVAANSK
HHHHHCCEEECCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCH
RARALFSKERMLTDIDQALQHIG
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKTILFISHTGQIGGAEVVLLSMAQHYRDRCHVILLADGPLRQKLSDCGVSVDVIAGRD
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCEEEEEECCC
SMLKVSRQGGRLEVIRAAPAALALAWRLARVARHYDILFPNSQKAAVITMLTGAILRKPV
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCH
VWYLHDILSSAHFSALQRRLVVTLANHMASWILTNSQVSRDAFIACGGKANHISVAPCGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCC
DAAPFDMISDKEINAAKQALGVGNHPLVGLFGRITPWKGQHVLIEALTRLPDVHALIVGD
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEEC
ALFGEDAYRQELQTLVATHGLTDRVHWLGFRQDIPLLMRTVDMIVHCSTAPEPYGLVIVE
HHHCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHEECCCCCCCCCEEEEE
GMLACRPVIAADGGASRELLGEDYPYLAAPGDSEALAKKIATLQSLNTEERESLVAANSK
HHHHHCCEEECCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCH
RARALFSKERMLTDIDQALQHIG
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]