| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is yhiI [H]
Identifier: 182677802
GI number: 182677802
Start: 900382
End: 901437
Strand: Direct
Name: yhiI [H]
Synonym: Bind_0809
Alternate gene names: 182677802
Gene position: 900382-901437 (Clockwise)
Preceding gene: 182677801
Following gene: 182677803
Centisome position: 21.59
GC content: 55.02
Gene sequence:
>1056_bases ATGTTGACGGTTACCGCCGCGCCTGCGTTGCCCGTCGAGATTGAGACCCAACGTCCCGCTCCTGGCAAAAGCTGGTGGCG ACGAAGCCTGACCGTCCTTTTGCTCTTGCTTGGGATCGGCTCCGCAATCGGCGGCTGGTATTGGTGGCATCAGCCTCGAA ACATCGTCCCGGCTGGGATCGTCTGGGGCAATGGCCGTATCGATGCCAGGGAAATCGATATCGACACCAAATTTGCCGGC CGGGTTTATGAACTTCTCGTCGATGAAGGCGATATGGTGACGGAGGGGCAGGTCGTCGCCCGTATGGATACACGTGATCT TCAGGCTCAGCTCGGACGCGAGGAGGCGCTCGTGCGCCAAAATGAGCATGCTATCGCGGAAGCCGAAGCGAATGTCGCCC AATTGAAGACGCAACAGGCCCTTGCGCAAATGGAACTCGATCGGACGAGTGCCTTATTCAAACGGGGCTATGCTACGCGG GAACTCTATGATCAGCGTTTTCAAGCCTTGAATGGAGCCAATGAGACTTTGAAAGCGGCGCAAGCTCGTGTCGTTGAAGC CCATCACGCCTATGATGCGGCGAAACACAATGTTGAACTGGACCAGGTCAATATCAACGACAATACGCTCGTTGCTCCCC GTGCCGGACGTATCCAGTACCGTATTTCCAGCCTCGGTGAGATTCTTCCCGCTGGAGGCAAGATCTTCAGCATGATCGAT ATCTCAGATGTTTACATGGATATCTATCTCCCAACGCTTGAAGCTGGCCGTGTCAAGATCGGCAATGACGCCCGCATCGT GCTTGATGCCTATCCCGAGCACCCAATCAGATCCAAGGTGACGTTCCTCGCTACACAGGCCCAGTTCACGCCGAAAGCTG TTGAAACGAAAAGCGAGCGCGACAAGCTGATGTTTCGCGTCAAGGTTCGGATTGATCCCGACATTTTAAAAAAATACGCC GATTCAGTCCGAACCGGCTTACCAGGGAATGCCTATGTCCGCATCGACCCGAATGTCGAATGGCCTTCCTGGCTGCAAAG CCGATCCGCCAACTAA
Upstream 100 bases:
>100_bases ATGATCTTCTGCTGCGGGAAACGAAACGGTGACGGAAGAGACATCGACCACGCCGAAAGTCGACACTGCTGTCGGTGCCG TCACCCCTGAGCAGAAGGGG
Downstream 100 bases:
>100_bases ATGGGATGAATCTTTTGTCGTAAGCGTCAGAGAGGTGAGTCTCCGCTACGGTAACAAACTCGCCCTTGATGATGTTTCCC TTGCCATTCCCTCGGGCAAA
Product: secretion protein HlyD family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MLTVTAAPALPVEIETQRPAPGKSWWRRSLTVLLLLLGIGSAIGGWYWWHQPRNIVPAGIVWGNGRIDAREIDIDTKFAG RVYELLVDEGDMVTEGQVVARMDTRDLQAQLGREEALVRQNEHAIAEAEANVAQLKTQQALAQMELDRTSALFKRGYATR ELYDQRFQALNGANETLKAAQARVVEAHHAYDAAKHNVELDQVNINDNTLVAPRAGRIQYRISSLGEILPAGGKIFSMID ISDVYMDIYLPTLEAGRVKIGNDARIVLDAYPEHPIRSKVTFLATQAQFTPKAVETKSERDKLMFRVKVRIDPDILKKYA DSVRTGLPGNAYVRIDPNVEWPSWLQSRSAN
Sequences:
>Translated_351_residues MLTVTAAPALPVEIETQRPAPGKSWWRRSLTVLLLLLGIGSAIGGWYWWHQPRNIVPAGIVWGNGRIDAREIDIDTKFAG RVYELLVDEGDMVTEGQVVARMDTRDLQAQLGREEALVRQNEHAIAEAEANVAQLKTQQALAQMELDRTSALFKRGYATR ELYDQRFQALNGANETLKAAQARVVEAHHAYDAAKHNVELDQVNINDNTLVAPRAGRIQYRISSLGEILPAGGKIFSMID ISDVYMDIYLPTLEAGRVKIGNDARIVLDAYPEHPIRSKVTFLATQAQFTPKAVETKSERDKLMFRVKVRIDPDILKKYA DSVRTGLPGNAYVRIDPNVEWPSWLQSRSAN >Mature_351_residues MLTVTAAPALPVEIETQRPAPGKSWWRRSLTVLLLLLGIGSAIGGWYWWHQPRNIVPAGIVWGNGRIDAREIDIDTKFAG RVYELLVDEGDMVTEGQVVARMDTRDLQAQLGREEALVRQNEHAIAEAEANVAQLKTQQALAQMELDRTSALFKRGYATR ELYDQRFQALNGANETLKAAQARVVEAHHAYDAAKHNVELDQVNINDNTLVAPRAGRIQYRISSLGEILPAGGKIFSMID ISDVYMDIYLPTLEAGRVKIGNDARIVLDAYPEHPIRSKVTFLATQAQFTPKAVETKSERDKLMFRVKVRIDPDILKKYA DSVRTGLPGNAYVRIDPNVEWPSWLQSRSAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789900, Length=349, Percent_Identity=39.8280802292264, Blast_Score=231, Evalue=6e-62, Organism=Escherichia coli, GI1787013, Length=308, Percent_Identity=27.5974025974026, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 39309; Mature: 39309
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTVTAAPALPVEIETQRPAPGKSWWRRSLTVLLLLLGIGSAIGGWYWWHQPRNIVPAGI CEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEE VWGNGRIDAREIDIDTKFAGRVYELLVDEGDMVTEGQVVARMDTRDLQAQLGREEALVRQ EECCCEEEEEEECCCCHHHHHHEEEHCCCCCEEECCEEEEEECHHHHHHHHCHHHHHHHC NEHAIAEAEANVAQLKTQQALAQMELDRTSALFKRGYATRELYDQRFQALNGANETLKAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH QARVVEAHHAYDAAKHNVELDQVNINDNTLVAPRAGRIQYRISSLGEILPAGGKIFSMID HHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCEEEEHHHHHHHCCCCCCEEEEEE ISDVYMDIYLPTLEAGRVKIGNDARIVLDAYPEHPIRSKVTFLATQAQFTPKAVETKSER HHHEEEEEEECCCCCCEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCCHHHHCCCCC DKLMFRVKVRIDPDILKKYADSVRTGLPGNAYVRIDPNVEWPSWLQSRSAN CEEEEEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCC >Mature Secondary Structure MLTVTAAPALPVEIETQRPAPGKSWWRRSLTVLLLLLGIGSAIGGWYWWHQPRNIVPAGI CEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEE VWGNGRIDAREIDIDTKFAGRVYELLVDEGDMVTEGQVVARMDTRDLQAQLGREEALVRQ EECCCEEEEEEECCCCHHHHHHEEEHCCCCCEEECCEEEEEECHHHHHHHHCHHHHHHHC NEHAIAEAEANVAQLKTQQALAQMELDRTSALFKRGYATRELYDQRFQALNGANETLKAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH QARVVEAHHAYDAAKHNVELDQVNINDNTLVAPRAGRIQYRISSLGEILPAGGKIFSMID HHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCEEEEHHHHHHHCCCCCCEEEEEE ISDVYMDIYLPTLEAGRVKIGNDARIVLDAYPEHPIRSKVTFLATQAQFTPKAVETKSER HHHEEEEEEECCCCCCEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCCHHHHCCCCC DKLMFRVKVRIDPDILKKYADSVRTGLPGNAYVRIDPNVEWPSWLQSRSAN CEEEEEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]