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The map label for this gene is 182677775

Identifier: 182677775

GI number: 182677775

Start: 874511

End: 875371

Strand: Direct

Name: 182677775

Synonym: Bind_0782

Alternate gene names: NA

Gene position: 874511-875371 (Clockwise)

Preceding gene: 182677773

Following gene: 182677777

Centisome position: 20.97

GC content: 56.68

Gene sequence:

>861_bases
ATGCAGCGGGATTGGCGTGAGGATTTTAGCGCTCAAGGCTATGTTATTTGTAAAAACATCCTGCCGCCCGATCTCATCGA
CGACCATGTGAAACAAGTCGCAGCGCTTTGCACCCGCTATGGCGTCGTCGATACGGCGAGCCTCGCCGCGCTGCCGATCG
AAACCGACGATCAGTTCATGCAGGCCATGCTTGATCTGCATTATCGCAATGAATTGGCCCGCAAGCTGATCTTCAATCGC
ATCATGCGGCATATGCTGTCCGAATTGTTCGGCGACGAACCGATTCTCTCCTTCGCACGCAGCTCTCTTTGGGAGCCCGG
AAATATGCGGGCGCATGTCGATACGGCGTTCCGTTCACCCGATGCGCCTTATAGCGTTTGCCGGACCTGGTGCGCGCTGG
AAGATATCGATCCCGAGAGCGGCCGCTTCTATCTGATTCCTGGCTCGCATCGCACCTTGGTTCCACGCCTCTGTGACGAG
GTTCTGGAGGAAAATCCGGAACTTCTCGCCTTGTCGCAAAAGATCAGCGAGGAACCAGCGTCCTGGTGGCGTCTGTTTGC
TCGCGGCTGGCCGAAGGTGAATGCGAAAGTGCCAGAACGGATTGATGGCAATGCGAAACTATCCTTCGACATGAAGAAGG
GCGATGTGATCTTCTTCAATCCGGCCCTTGTCCATGGCACCGTTGATTGCCTCAATTCGAACGGAACCCGCAAAGTGATG
ATCTGCGAATGGACGACGCGTGCGGCCTGGGCCGCTTCCGGTTTCTCACGGCCCTTCTACGAGGAAAATCCCGCGCCGTC
CGTCGAAGAAGACAAAGAGGAGATCGAACCGTTGATCGCCGCGCGCGTGGCCGTGGGGTAA

Upstream 100 bases:

>100_bases
TTCATTTTTCAACTGGGCGGTCAACGCCCTGCGACGAGGTTTCCTCGTCTTGCTCCGGGGTCGGGGCGAAACTTTTGTGG
CAAGCATGTCAGGAGTCATC

Downstream 100 bases:

>100_bases
TGATCGTCCAATCTCTGGGCTGAACAGAATCCGCGCGAGTCGAAGATCGTTGACCTCCATTACAGAGGGGAAGCCTCACC
GGATAGAGGAGTGAGGCTCT

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MQRDWREDFSAQGYVICKNILPPDLIDDHVKQVAALCTRYGVVDTASLAALPIETDDQFMQAMLDLHYRNELARKLIFNR
IMRHMLSELFGDEPILSFARSSLWEPGNMRAHVDTAFRSPDAPYSVCRTWCALEDIDPESGRFYLIPGSHRTLVPRLCDE
VLEENPELLALSQKISEEPASWWRLFARGWPKVNAKVPERIDGNAKLSFDMKKGDVIFFNPALVHGTVDCLNSNGTRKVM
ICEWTTRAAWAASGFSRPFYEENPAPSVEEDKEEIEPLIAARVAVG

Sequences:

>Translated_286_residues
MQRDWREDFSAQGYVICKNILPPDLIDDHVKQVAALCTRYGVVDTASLAALPIETDDQFMQAMLDLHYRNELARKLIFNR
IMRHMLSELFGDEPILSFARSSLWEPGNMRAHVDTAFRSPDAPYSVCRTWCALEDIDPESGRFYLIPGSHRTLVPRLCDE
VLEENPELLALSQKISEEPASWWRLFARGWPKVNAKVPERIDGNAKLSFDMKKGDVIFFNPALVHGTVDCLNSNGTRKVM
ICEWTTRAAWAASGFSRPFYEENPAPSVEEDKEEIEPLIAARVAVG
>Mature_286_residues
MQRDWREDFSAQGYVICKNILPPDLIDDHVKQVAALCTRYGVVDTASLAALPIETDDQFMQAMLDLHYRNELARKLIFNR
IMRHMLSELFGDEPILSFARSSLWEPGNMRAHVDTAFRSPDAPYSVCRTWCALEDIDPESGRFYLIPGSHRTLVPRLCDE
VLEENPELLALSQKISEEPASWWRLFARGWPKVNAKVPERIDGNAKLSFDMKKGDVIFFNPALVHGTVDCLNSNGTRKVM
ICEWTTRAAWAASGFSRPFYEENPAPSVEEDKEEIEPLIAARVAVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32488; Mature: 32488

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRDWREDFSAQGYVICKNILPPDLIDDHVKQVAALCTRYGVVDTASLAALPIETDDQFM
CCCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCHHHH
QAMLDLHYRNELARKLIFNRIMRHMLSELFGDEPILSFARSSLWEPGNMRAHVDTAFRSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEHHHCCC
DAPYSVCRTWCALEDIDPESGRFYLIPGSHRTLVPRLCDEVLEENPELLALSQKISEEPA
CCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEHHHHHCCCHH
SWWRLFARGWPKVNAKVPERIDGNAKLSFDMKKGDVIFFNPALVHGTVDCLNSNGTRKVM
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHCCCCCEEEE
ICEWTTRAAWAASGFSRPFYEENPAPSVEEDKEEIEPLIAARVAVG
EEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRDWREDFSAQGYVICKNILPPDLIDDHVKQVAALCTRYGVVDTASLAALPIETDDQFM
CCCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCHHHH
QAMLDLHYRNELARKLIFNRIMRHMLSELFGDEPILSFARSSLWEPGNMRAHVDTAFRSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEHHHCCC
DAPYSVCRTWCALEDIDPESGRFYLIPGSHRTLVPRLCDEVLEENPELLALSQKISEEPA
CCCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEHHHHHCCCHH
SWWRLFARGWPKVNAKVPERIDGNAKLSFDMKKGDVIFFNPALVHGTVDCLNSNGTRKVM
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHCCCCCEEEE
ICEWTTRAAWAASGFSRPFYEENPAPSVEEDKEEIEPLIAARVAVG
EEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA