| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677629
Identifier: 182677629
GI number: 182677629
Start: 719156
End: 720670
Strand: Direct
Name: 182677629
Synonym: Bind_0636
Alternate gene names: NA
Gene position: 719156-720670 (Clockwise)
Preceding gene: 182677628
Following gene: 182677630
Centisome position: 17.25
GC content: 50.43
Gene sequence:
>1515_bases ATGGCGTCTTCCGCGTTGGAAGTTCTGGAAAAGCTTAAAGCTGCACCGGTCATGGACAATCCGCACCTCGCAAAGGCCAA TGGTACTTTTTTACAAAGTGGTTCTGCGACCGGGGGATTAACCTATTATGATCTCGATCTGGGTGCGAAACTCGTCTATC CGGTGTTAACCCCCCTGCGTAACGTGATTCCACGTGTGTCTGGTCGTGGAGGTATTCAAGCCTCCTGGCGTGCGATTACT GCCATTAATGCGAGCGGTATGCGTGTGGGCGTTTCTGAATCCAATCGAGGGGGTGTTCAAGCTGTTGCCACGCACGATTA TGTTGCTTCCTACAAGGGTATCGGTATTGAAAGCACGGCTTCTTTCGAAGCCTTTTATGCGGCACAGGGATTTGATGACA TTCGTGCCTTAGCGGCAAAAACCGGCCTTGAATCTCTTATGCTCTCTGAAGAAAGCATGATTCTCGGCGGAAATAACTCA CTTCCTCTTGGAACCCCGCCAATTCCTACGCTAACGGCGTCCTCGACGGGTGGTTCACTGGCGGCTCAATCCTGGTCTGT TCTTGTCGTGCCTCTTTCTCATGACGGAATGATCAATGCCTCTGTTACTGGGGGAGTCCAGCAGTTGATTCAGCGTACGA ACGCTGACGGTTCCATCGATAAATTCGGGGGCGGTGCGGGATATAAAAGCTCGAACGCAATCGTGACCACGACTGGTACA ACGAGCTCCATTGCTGCGACAGTTACAGCTGTGCCCGGCGCTTTAGGCTATGCTTGGTTTTGGGGAGCTCCGAATTTGGA GTCCTTGGGGGCGATCACGTCGATTAATTCCGTTTCCATTATAGGTGCTGCAACTGGTACATTGAAGGCCACATCGTTAA ACAACAGTACAAGTGCAACGGATAACACGGACTATTCGACCAATAATTTGGCGTTTGATGGTTTGTTAACGCAGGCCATG AAACAAGGCTCGGGCGCATATTATGCGATACAGCCAATGGGAACGCCCGGCATCGGGACGCCGCTGACTTCCGATGCGGC GGGCGGAATCGTCGAAATCGACCTGGCTTTGAAATCCATGTGGGACAATTTCCGACTTTCTCCCGATACGATCTGGGTGA ATAGCCAGGAAGCGTTGAATCTTTCCAAAAAGATTTTGGCTGGATCTTCCAGTTCCGCCCAGCGCTTTGTCTTCAATTCA GAACAGGGCATGCTCGGTGGCGGCATCATGGTTCGCACTTATCTCAATCGTTTCTCGATGCAGGGTGCTTCTATTCTGGA TATCAAAATTCACCCGAATATGCCTGCGGGTACACTTCTCATGACAACCAGTCAATTGCCATACCCGCTTTCCAATGTGG GTAACGTGATGCAGATCAGGACGCGGCAGGATTATTATCAGGTCGAATGGCCATTGCGTTCTCGTAAATATGAGTATGGC GTATATGCGGATGAGGTCTTACAGCATTATTTTCCCCCGAGTCTGGCAGTGATCACCAATATTGGAAATGCATAA
Upstream 100 bases:
>100_bases AATTTCAAAGACCCTTTATAAACGTAAACTCTCAATTTGTAAGCTTTTGTTCTTTGGTTGTCCTAGCAGACAGCACAATT TCCTTTAGTTGGAGTTGATT
Downstream 100 bases:
>100_bases GCTCATCTATTCGTAGGGGGAAAAGCATGAATGGAAAGTCGGGCAAATGTCTGGCTTTTCCGCGAGGTTGCATGCCAGGA AAAGTGAAGCTCTATGCCCC
Product: putative phage associated protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MASSALEVLEKLKAAPVMDNPHLAKANGTFLQSGSATGGLTYYDLDLGAKLVYPVLTPLRNVIPRVSGRGGIQASWRAIT AINASGMRVGVSESNRGGVQAVATHDYVASYKGIGIESTASFEAFYAAQGFDDIRALAAKTGLESLMLSEESMILGGNNS LPLGTPPIPTLTASSTGGSLAAQSWSVLVVPLSHDGMINASVTGGVQQLIQRTNADGSIDKFGGGAGYKSSNAIVTTTGT TSSIAATVTAVPGALGYAWFWGAPNLESLGAITSINSVSIIGAATGTLKATSLNNSTSATDNTDYSTNNLAFDGLLTQAM KQGSGAYYAIQPMGTPGIGTPLTSDAAGGIVEIDLALKSMWDNFRLSPDTIWVNSQEALNLSKKILAGSSSSAQRFVFNS EQGMLGGGIMVRTYLNRFSMQGASILDIKIHPNMPAGTLLMTTSQLPYPLSNVGNVMQIRTRQDYYQVEWPLRSRKYEYG VYADEVLQHYFPPSLAVITNIGNA
Sequences:
>Translated_504_residues MASSALEVLEKLKAAPVMDNPHLAKANGTFLQSGSATGGLTYYDLDLGAKLVYPVLTPLRNVIPRVSGRGGIQASWRAIT AINASGMRVGVSESNRGGVQAVATHDYVASYKGIGIESTASFEAFYAAQGFDDIRALAAKTGLESLMLSEESMILGGNNS LPLGTPPIPTLTASSTGGSLAAQSWSVLVVPLSHDGMINASVTGGVQQLIQRTNADGSIDKFGGGAGYKSSNAIVTTTGT TSSIAATVTAVPGALGYAWFWGAPNLESLGAITSINSVSIIGAATGTLKATSLNNSTSATDNTDYSTNNLAFDGLLTQAM KQGSGAYYAIQPMGTPGIGTPLTSDAAGGIVEIDLALKSMWDNFRLSPDTIWVNSQEALNLSKKILAGSSSSAQRFVFNS EQGMLGGGIMVRTYLNRFSMQGASILDIKIHPNMPAGTLLMTTSQLPYPLSNVGNVMQIRTRQDYYQVEWPLRSRKYEYG VYADEVLQHYFPPSLAVITNIGNA >Mature_503_residues ASSALEVLEKLKAAPVMDNPHLAKANGTFLQSGSATGGLTYYDLDLGAKLVYPVLTPLRNVIPRVSGRGGIQASWRAITA INASGMRVGVSESNRGGVQAVATHDYVASYKGIGIESTASFEAFYAAQGFDDIRALAAKTGLESLMLSEESMILGGNNSL PLGTPPIPTLTASSTGGSLAAQSWSVLVVPLSHDGMINASVTGGVQQLIQRTNADGSIDKFGGGAGYKSSNAIVTTTGTT SSIAATVTAVPGALGYAWFWGAPNLESLGAITSINSVSIIGAATGTLKATSLNNSTSATDNTDYSTNNLAFDGLLTQAMK QGSGAYYAIQPMGTPGIGTPLTSDAAGGIVEIDLALKSMWDNFRLSPDTIWVNSQEALNLSKKILAGSSSSAQRFVFNSE QGMLGGGIMVRTYLNRFSMQGASILDIKIHPNMPAGTLLMTTSQLPYPLSNVGNVMQIRTRQDYYQVEWPLRSRKYEYGV YADEVLQHYFPPSLAVITNIGNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52827; Mature: 52696
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSALEVLEKLKAAPVMDNPHLAKANGTFLQSGSATGGLTYYDLDLGAKLVYPVLTPLR CCCHHHHHHHHHHCCCCCCCCCEEECCCCEEECCCCCCCEEEEECCCCCHHHHHHHHHHH NVIPRVSGRGGIQASWRAITAINASGMRVGVSESNRGGVQAVATHDYVASYKGIGIESTA HHHHCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEHHHHHHHCCCCCCCCC SFEAFYAAQGFDDIRALAAKTGLESLMLSEESMILGGNNSLPLGTPPIPTLTASSTGGSL CCEEEEECCCHHHHHHHHHHHCHHHHHCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCE AAQSWSVLVVPLSHDGMINASVTGGVQQLIQRTNADGSIDKFGGGAGYKSSNAIVTTTGT EECCCEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEECCC TSSIAATVTAVPGALGYAWFWGAPNLESLGAITSINSVSIIGAATGTLKATSLNNSTSAT CCHHEEEEECCCCCCCEEEEECCCCHHHCCCEEECCCEEEEEECCCEEEEEECCCCCCCC DNTDYSTNNLAFDGLLTQAMKQGSGAYYAIQPMGTPGIGTPLTSDAAGGIVEIDLALKSM CCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHH WDNFRLSPDTIWVNSQEALNLSKKILAGSSSSAQRFVFNSEQGMLGGGIMVRTYLNRFSM HHCCCCCCCEEEECCHHHHCHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC QGASILDIKIHPNMPAGTLLMTTSQLPYPLSNVGNVMQIRTRQDYYQVEWPLRSRKYEYG CCCEEEEEEECCCCCCCEEEEEECCCCCCHHHCCCEEEEEECCCEEEEECCCCCCCEECC VYADEVLQHYFPPSLAVITNIGNA CCHHHHHHHHCCCCEEEEECCCCC >Mature Secondary Structure ASSALEVLEKLKAAPVMDNPHLAKANGTFLQSGSATGGLTYYDLDLGAKLVYPVLTPLR CCHHHHHHHHHHCCCCCCCCCEEECCCCEEECCCCCCCEEEEECCCCCHHHHHHHHHHH NVIPRVSGRGGIQASWRAITAINASGMRVGVSESNRGGVQAVATHDYVASYKGIGIESTA HHHHCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEHHHHHHHCCCCCCCCC SFEAFYAAQGFDDIRALAAKTGLESLMLSEESMILGGNNSLPLGTPPIPTLTASSTGGSL CCEEEEECCCHHHHHHHHHHHCHHHHHCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCE AAQSWSVLVVPLSHDGMINASVTGGVQQLIQRTNADGSIDKFGGGAGYKSSNAIVTTTGT EECCCEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEECCC TSSIAATVTAVPGALGYAWFWGAPNLESLGAITSINSVSIIGAATGTLKATSLNNSTSAT CCHHEEEEECCCCCCCEEEEECCCCHHHCCCEEECCCEEEEEECCCEEEEEECCCCCCCC DNTDYSTNNLAFDGLLTQAMKQGSGAYYAIQPMGTPGIGTPLTSDAAGGIVEIDLALKSM CCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHH WDNFRLSPDTIWVNSQEALNLSKKILAGSSSSAQRFVFNSEQGMLGGGIMVRTYLNRFSM HHCCCCCCCEEEECCHHHHCHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC QGASILDIKIHPNMPAGTLLMTTSQLPYPLSNVGNVMQIRTRQDYYQVEWPLRSRKYEYG CCCEEEEEEECCCCCCCEEEEEECCCCCCHHHCCCEEEEEECCCEEEEECCCCCCCEECC VYADEVLQHYFPPSLAVITNIGNA CCHHHHHHHHCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA