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The map label for this gene is 182682520

Identifier: 182682520

GI number: 182682520

Start: 2247199

End: 2248131

Strand: Reverse

Name: 182682520

Synonym: XfasM23_2007

Alternate gene names: NA

Gene position: 2248131-2247199 (Counterclockwise)

Preceding gene: 182682521

Following gene: 182682518

Centisome position: 88.66

GC content: 55.84

Gene sequence:

>933_bases
ATGAAGCGTGCTAATAGCAACATCAAATACTGGGTGACATGGGCAATGCTGCTGGGTGGGAGTGTTGCAGTTTGTTCCCA
TGCATACGGCGATGTTTCCGATGGGCGTGATGGATGGGGTGCAATGCAGAGGCTACCCAGTGCATCCTCTGGCGTTGCGA
TCACTGATCCGGATGCTGGCGTCGCGGGTTTGCCTCCTCTGCCGGAAAAAGTGCAGTCTCACATAGCGACTCCAATACCA
GGCAGTGGCGTCAAAACCCTGCCGCTCGTCGAATACTATGCCCCGGGCAGTGATCGGCTGGCGATCATGATCTCCGGTGA
TGGTGGTTGGCGCACACTGGATCGTAATTTATCGAAGGAATTACAGCGCCGTGGTATTTCCGTCGTGGGATGGAATAGCC
TGCGTTACTTCTGGAAGCTGCGTACCCCTGAGCAGCTGGGTGACGATCTTAGCCGTGTCATTGCCGACTATCAGCGGCGT
TGGGGTGCCCACCAAGTCATCCTGATCGGTTATTCATTTGGTGCCGACGTGATGCCATTTGCCTATGCTCACTTGATGCC
GATGCAGCGCAACGACGTTGATTTTATTTCTCTGCTTGCTCCAGGTCGCCAGGCCGACTTCAAAGCCCGGATTTTTGGTC
GGTTGGGATGGGGCGAGCATGGCACCCAGGATGTTTTGACGGCCTTAGGCGCGCTTGATTTGCAGCGCGTGCAATGCGTC
TATGGACAGAATGATAAAGATGCCGTCTGTTCAGAATTGCGTGAACGTATATTCGATGTCGTGATGCGTCCCGGTGGTCA
TCACTTCGACGGCGATACTGTCAAACTTGCCGATGTGATCTTACAAGGGTGGCGGCGTGCCGGTTGGGGTGCGGGGAACC
ACGCAACGGGGGGAGCAGCCATCGTTGAGGGCACCAGCCGTTCGCAGCCGTGA

Upstream 100 bases:

>100_bases
TATAACGTGCAGCTCTTTAGGGTAGAGGATCGTCACGGCGGGTGCTTGTCATGACGTCTTCCTCATAACATTCGGCGAAG
ACTGTTTCGGCGAGGACTGT

Downstream 100 bases:

>100_bases
GTAGCTGCTGCGCACCATAACCGATTGCGATGTTTTTAGTTCATGTGCTGCTGATTTCGACCCTGACCCGGAGCTGGCCA
TGTGCCAGCTTGGTGTCTAG

Product: virulence factor family protein

Products: NA

Alternate protein names: Virulence Protein; Acid lerance Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Type IV Secretion System VirJ-Like Protein; AcvB-Related Protein; Acid Virulence Protein B; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKRANSNIKYWVTWAMLLGGSVAVCSHAYGDVSDGRDGWGAMQRLPSASSGVAITDPDAGVAGLPPLPEKVQSHIATPIP
GSGVKTLPLVEYYAPGSDRLAIMISGDGGWRTLDRNLSKELQRRGISVVGWNSLRYFWKLRTPEQLGDDLSRVIADYQRR
WGAHQVILIGYSFGADVMPFAYAHLMPMQRNDVDFISLLAPGRQADFKARIFGRLGWGEHGTQDVLTALGALDLQRVQCV
YGQNDKDAVCSELRERIFDVVMRPGGHHFDGDTVKLADVILQGWRRAGWGAGNHATGGAAIVEGTSRSQP

Sequences:

>Translated_310_residues
MKRANSNIKYWVTWAMLLGGSVAVCSHAYGDVSDGRDGWGAMQRLPSASSGVAITDPDAGVAGLPPLPEKVQSHIATPIP
GSGVKTLPLVEYYAPGSDRLAIMISGDGGWRTLDRNLSKELQRRGISVVGWNSLRYFWKLRTPEQLGDDLSRVIADYQRR
WGAHQVILIGYSFGADVMPFAYAHLMPMQRNDVDFISLLAPGRQADFKARIFGRLGWGEHGTQDVLTALGALDLQRVQCV
YGQNDKDAVCSELRERIFDVVMRPGGHHFDGDTVKLADVILQGWRRAGWGAGNHATGGAAIVEGTSRSQP
>Mature_310_residues
MKRANSNIKYWVTWAMLLGGSVAVCSHAYGDVSDGRDGWGAMQRLPSASSGVAITDPDAGVAGLPPLPEKVQSHIATPIP
GSGVKTLPLVEYYAPGSDRLAIMISGDGGWRTLDRNLSKELQRRGISVVGWNSLRYFWKLRTPEQLGDDLSRVIADYQRR
WGAHQVILIGYSFGADVMPFAYAHLMPMQRNDVDFISLLAPGRQADFKARIFGRLGWGEHGTQDVLTALGALDLQRVQCV
YGQNDKDAVCSELRERIFDVVMRPGGHHFDGDTVKLADVILQGWRRAGWGAGNHATGGAAIVEGTSRSQP

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33829; Mature: 33829

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRANSNIKYWVTWAMLLGGSVAVCSHAYGDVSDGRDGWGAMQRLPSASSGVAITDPDAG
CCCCCCCCEEHHHHHHHHCCCCEEHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCC
VAGLPPLPEKVQSHIATPIPGSGVKTLPLVEYYAPGSDRLAIMISGDGGWRTLDRNLSKE
CCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
LQRRGISVVGWNSLRYFWKLRTPEQLGDDLSRVIADYQRRWGAHQVILIGYSFGADVMPF
HHHCCCEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH
AYAHLMPMQRNDVDFISLLAPGRQADFKARIFGRLGWGEHGTQDVLTALGALDLQRVQCV
HHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
YGQNDKDAVCSELRERIFDVVMRPGGHHFDGDTVKLADVILQGWRRAGWGAGNHATGGAA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEE
IVEGTSRSQP
EEECCCCCCC
>Mature Secondary Structure
MKRANSNIKYWVTWAMLLGGSVAVCSHAYGDVSDGRDGWGAMQRLPSASSGVAITDPDAG
CCCCCCCCEEHHHHHHHHCCCCEEHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCC
VAGLPPLPEKVQSHIATPIPGSGVKTLPLVEYYAPGSDRLAIMISGDGGWRTLDRNLSKE
CCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
LQRRGISVVGWNSLRYFWKLRTPEQLGDDLSRVIADYQRRWGAHQVILIGYSFGADVMPF
HHHCCCEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH
AYAHLMPMQRNDVDFISLLAPGRQADFKARIFGRLGWGEHGTQDVLTALGALDLQRVQCV
HHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
YGQNDKDAVCSELRERIFDVVMRPGGHHFDGDTVKLADVILQGWRRAGWGAGNHATGGAA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEE
IVEGTSRSQP
EEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA