| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is yjeE [H]
Identifier: 182682517
GI number: 182682517
Start: 2243288
End: 2243776
Strand: Reverse
Name: yjeE [H]
Synonym: XfasM23_2004
Alternate gene names: 182682517
Gene position: 2243776-2243288 (Counterclockwise)
Preceding gene: 182682518
Following gene: 182682516
Centisome position: 88.49
GC content: 57.46
Gene sequence:
>489_bases GTGATCGAATTTCAACTCACTGATGTTGCTGCGACTGAGCGTTTGGGCATGGTGTTAGCCCACAGTCGGCCGCTACCTGC CGTGTTGTCTCTACAAGGTGATATTGGGGCTGGTAAATCGACATTGGCACGCGCACTGCTGCGTGCGCTGGGTGTCACTG GGGCGATCCGAAGTCCGACCTACACGCTGGTTGAGCGGTATGTGTTGGCCGATGGCGGTGAGGCTTGGCACTTGGATCTA TACCGGATTGGCAATGCGTCTGAACTGGATTTCCTCGGTTTGGATGAGGACGAGGTTGTGCTATGGCTGGTGGAGTGGCC TGAGCGTGGCGCTGGTGCGTTGCCGTCGTTGGATCTGGAAGTGGCTTTGGCCATTGAGGGTGCCGGGCGTCGTGTCCGAT TACGTGCCGGCAGTACACAAGGTGAGGCATGGTTGGCGGCCGCGGTGATAAAAATGCAATTGCCGGTTGTTTTTCCAGGA GTGCCCTAG
Upstream 100 bases:
>100_bases CTGCTGGTGACCAGGTGGCGCGTGATGGGGGGGAACGTGGTTTGCTGCCTAGCGATGTCCTGCCGGTACTACGTCGTTTG ATCAACCCGGATTCTGCGCC
Downstream 100 bases:
>100_bases GAAATTACTCCAGGCTATGGATTATTAAAGATAAATTTCTTGCAATTCATAGGGGGCGATGCTTGAATCATTCCCCATGA TTCCGGTGAGTCTTCGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MIEFQLTDVAATERLGMVLAHSRPLPAVLSLQGDIGAGKSTLARALLRALGVTGAIRSPTYTLVERYVLADGGEAWHLDL YRIGNASELDFLGLDEDEVVLWLVEWPERGAGALPSLDLEVALAIEGAGRRVRLRAGSTQGEAWLAAAVIKMQLPVVFPG VP
Sequences:
>Translated_162_residues MIEFQLTDVAATERLGMVLAHSRPLPAVLSLQGDIGAGKSTLARALLRALGVTGAIRSPTYTLVERYVLADGGEAWHLDL YRIGNASELDFLGLDEDEVVLWLVEWPERGAGALPSLDLEVALAIEGAGRRVRLRAGSTQGEAWLAAAVIKMQLPVVFPG VP >Mature_162_residues MIEFQLTDVAATERLGMVLAHSRPLPAVLSLQGDIGAGKSTLARALLRALGVTGAIRSPTYTLVERYVLADGGEAWHLDL YRIGNASELDFLGLDEDEVVLWLVEWPERGAGALPSLDLEVALAIEGAGRRVRLRAGSTQGEAWLAAAVIKMQLPVVFPG VP
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=143, Percent_Identity=43.3566433566434, Blast_Score=112, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 17325; Mature: 17325
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEFQLTDVAATERLGMVLAHSRPLPAVLSLQGDIGAGKSTLARALLRALGVTGAIRSPT CEEEEECCHHHHHHHCEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCH YTLVERYVLADGGEAWHLDLYRIGNASELDFLGLDEDEVVLWLVEWPERGAGALPSLDLE HHHHHHHHCCCCCCEEEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCEE VALAIEGAGRRVRLRAGSTQGEAWLAAAVIKMQLPVVFPGVP EEEEEECCCCEEEEEECCCCCCHHHHEEEHHEECCEEECCCC >Mature Secondary Structure MIEFQLTDVAATERLGMVLAHSRPLPAVLSLQGDIGAGKSTLARALLRALGVTGAIRSPT CEEEEECCHHHHHHHCEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCH YTLVERYVLADGGEAWHLDLYRIGNASELDFLGLDEDEVVLWLVEWPERGAGALPSLDLE HHHHHHHHCCCCCCEEEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCEE VALAIEGAGRRVRLRAGSTQGEAWLAAAVIKMQLPVVFPGVP EEEEEECCCCEEEEEECCCCCCHHHHEEEHHEECCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]