| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681860
Identifier: 182681860
GI number: 182681860
Start: 1459689
End: 1460105
Strand: Reverse
Name: 182681860
Synonym: XfasM23_1327
Alternate gene names: NA
Gene position: 1460105-1459689 (Counterclockwise)
Preceding gene: 182681861
Following gene: 182681859
Centisome position: 57.58
GC content: 34.05
Gene sequence:
>417_bases ATGAATTTCATATATCCAAGAAATAAAGTGTTCATTAAGCTATTTATTCTTGCTGTATTCTGCAGCGGCCATTTATACGC ACAAGATGCAACCTCAGATTTGGAAAAAGATAAACAAAATGCCATTTCGCAGGCCCTCGATAATCTTATGGATATATATT TAAAAATTCAAAAAGATGCACTTTCTGCAGTTGCTGTAAAAAGAAGTTGCTCTAAAATTTATCCTCAGCTAAAGGAAAAA TTTGAGGCTAATATTGTTTCTGGAAAAGGTGGATTCGAGCAAAAGATCAGAGAGGAAATGAAAAAGCTTGAGGCGAGTAA AGATCCCTATGTACTTGGTCAAATTGATGGTGCTTCAATGATGCTTTTTAATGAAAATATTATGAAATCAGAGTGCAAAT CGTTTGCCGGAATGTAA
Upstream 100 bases:
>100_bases CTTTAAGGGGCGGCATCTGTGTCGGTATTACTACAAATTTATAGATTCCAATTGACCTGTATTAATAATCATTAATTGAC TGAGAAAATAAAGAGATCGA
Downstream 100 bases:
>100_bases AGAATGAATTTTTAATACATCAAAGGATTGTGGTGAGGCCTCAATGGGCCGGCCTCACCACCGCCCTGGGCGCCAAAAAC ACCATTGATGCCGTGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MNFIYPRNKVFIKLFILAVFCSGHLYAQDATSDLEKDKQNAISQALDNLMDIYLKIQKDALSAVAVKRSCSKIYPQLKEK FEANIVSGKGGFEQKIREEMKKLEASKDPYVLGQIDGASMMLFNENIMKSECKSFAGM
Sequences:
>Translated_138_residues MNFIYPRNKVFIKLFILAVFCSGHLYAQDATSDLEKDKQNAISQALDNLMDIYLKIQKDALSAVAVKRSCSKIYPQLKEK FEANIVSGKGGFEQKIREEMKKLEASKDPYVLGQIDGASMMLFNENIMKSECKSFAGM >Mature_138_residues MNFIYPRNKVFIKLFILAVFCSGHLYAQDATSDLEKDKQNAISQALDNLMDIYLKIQKDALSAVAVKRSCSKIYPQLKEK FEANIVSGKGGFEQKIREEMKKLEASKDPYVLGQIDGASMMLFNENIMKSECKSFAGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15602; Mature: 15602
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFIYPRNKVFIKLFILAVFCSGHLYAQDATSDLEKDKQNAISQALDNLMDIYLKIQKDA CCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSAVAVKRSCSKIYPQLKEKFEANIVSGKGGFEQKIREEMKKLEASKDPYVLGQIDGASM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEE MLFNENIMKSECKSFAGM EEECCHHHHHHHHHHCCC >Mature Secondary Structure MNFIYPRNKVFIKLFILAVFCSGHLYAQDATSDLEKDKQNAISQALDNLMDIYLKIQKDA CCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSAVAVKRSCSKIYPQLKEKFEANIVSGKGGFEQKIREEMKKLEASKDPYVLGQIDGASM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEE MLFNENIMKSECKSFAGM EEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA