| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681829
Identifier: 182681829
GI number: 182681829
Start: 1425693
End: 1426079
Strand: Reverse
Name: 182681829
Synonym: XfasM23_1294
Alternate gene names: NA
Gene position: 1426079-1425693 (Counterclockwise)
Preceding gene: 182681831
Following gene: 182681827
Centisome position: 56.24
GC content: 47.03
Gene sequence:
>387_bases ATGTCTTTCGGAGAGTTGCTCGATAAGATTGCGATTCTGCAAATCAAGTCTGAAAGGATCACGGATGTAGCGAAACTGGT TAACGTCCGTAATGAGCTTTCAGCTCTGGAAAAGATTTGGATGGCATACCCGACTTCCTCCAGTGAAATCCCACGTTTGC GCACTGAGTTGAAAGCGGTCAATGAGCGATTGTGGGGGATAGAGGATGAAATTCGGCTCAAGGAGAAGGCACAGACTTTC GATAAGCAGTTCATTCATCTGGCGCGCAGTGTGTATTTTGAGAATGACGAGCGTGCGCGGATTAAAAAGGAGATCAATCT CGCGTTGGATTCCCCCTATGTTGAGGAAAAGTCCTATCAGGATTATCGATCAGCCGAGACGCTTTGA
Upstream 100 bases:
>100_bases TGAAGAGCAAGGTATTGGTAATGCGATTTTAATCCGCTGGCATTATACTTCCATCTCTTAAGTTTTGTTGGTGCTTGTTA TGTCAGGAATCTTCGTACCC
Downstream 100 bases:
>100_bases ATGTTTCTCTTCGCTGTTCAGTGGTGTGCGTAGTCAGCGCGGTAGCGTTCGAATGCGGCGATGGCGTCTTCAACAGTCAC CAAGTCCATGACTCCATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSFGELLDKIAILQIKSERITDVAKLVNVRNELSALEKIWMAYPTSSSEIPRLRTELKAVNERLWGIEDEIRLKEKAQTF DKQFIHLARSVYFENDERARIKKEINLALDSPYVEEKSYQDYRSAETL
Sequences:
>Translated_128_residues MSFGELLDKIAILQIKSERITDVAKLVNVRNELSALEKIWMAYPTSSSEIPRLRTELKAVNERLWGIEDEIRLKEKAQTF DKQFIHLARSVYFENDERARIKKEINLALDSPYVEEKSYQDYRSAETL >Mature_127_residues SFGELLDKIAILQIKSERITDVAKLVNVRNELSALEKIWMAYPTSSSEIPRLRTELKAVNERLWGIEDEIRLKEKAQTFD KQFIHLARSVYFENDERARIKKEINLALDSPYVEEKSYQDYRSAETL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15037; Mature: 14906
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFGELLDKIAILQIKSERITDVAKLVNVRNELSALEKIWMAYPTSSSEIPRLRTELKAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH NERLWGIEDEIRLKEKAQTFDKQFIHLARSVYFENDERARIKKEINLALDSPYVEEKSYQ HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHH DYRSAETL HHHHCCCC >Mature Secondary Structure SFGELLDKIAILQIKSERITDVAKLVNVRNELSALEKIWMAYPTSSSEIPRLRTELKAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH NERLWGIEDEIRLKEKAQTFDKQFIHLARSVYFENDERARIKKEINLALDSPYVEEKSYQ HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHH DYRSAETL HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA