| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is opgH [H]
Identifier: 182681771
GI number: 182681771
Start: 1362782
End: 1364686
Strand: Reverse
Name: opgH [H]
Synonym: XfasM23_1229
Alternate gene names: 182681771
Gene position: 1364686-1362782 (Counterclockwise)
Preceding gene: 182681773
Following gene: 182681770
Centisome position: 53.82
GC content: 52.39
Gene sequence:
>1905_bases ATGGAAATGCAGATAGGCGCTTCTGAAGTCGTTCAAGTCTTGGATACTGGTTGTGCGGTGTTGCCTCCAGAGTCTCCGTT ACCGATGCCTGAGCAGTCGTTACGTAAGGGGCGTTTACATGTGCCACGTCAGCGTACTGCGCCGTTGGGGATTGGTTTAC GTCGCTTCTACCTGATCGGTGGGACGATGTCGATGAGTTTGATTGCAACCTGGGTGATGCTCGCCGTGATGTGGCCTGGT GGGATCAATGTGCTTGAAGGTTGCTTGCTAGTACTGTTCATGTTCTTGTTTGCTTGGGTCACCATGTCCTTTGCTAGTGC ATTAGCTGGGTTTTTCTGCATGGTGTTCGGTGGTGGTCGTAAGCTTGGTATCGATCCGCAGATGCCGTTGCCTGATTTGC ACACTTACACCGCATTGTTGGTGCCTACTTACCAGGAGGATCCGTGTCGGTTGTTGGCGGGGTTGCAGGCGATCTATGAA TCGTTGTCCGAAACGGGACAGTTGGAACATTTCGAGTTTTTCGTGCTGAGTGATAGTCGCCGTGAAGAATTCGGGTTGGC GGAGGAGCGGGAGTATGCTGCCCTGTGTGAGCGGCTTGGTGCTCATGGCAGAATCTTCTATAGGCGCCGCGCAGATAACA CTGGACGCAAGGCAGGTAACATCGCCGATTGGGTACGCCGCTTTGGTGGTGCTTACCAGCAGATGCTGATCTTGGATGCT GACAGTGTGATGACTGGGGATACAGTCGTCCGCCTAGTTGCTGCGATGGAGTCCAATCCAGATGTTGGTTTGATTCAGAG CTTGCCGGTTGTAGTGGGTGGCCGCACTCTATTTGCGCGGATGCAGCAATTCGGTGCTTGTGTGTACGGTCCGATCATTG CCTACGGTGTCGCTTGGTGGCATGGCGCAGAGAGCAATTATTGGGGCCATAATGCGGTGATTCGTACGAAGGCTTTTGCA GATCATGCTGGGTTGCCTGCATTGCCTGGACGGAAGCCCTTTGGCGGTCACGTGCTTAGCCACGATTTTGTTGAGGCTGC TCTCATACGACGTGGTGGCTGGGCGACGCATATGGTGCCGTACTTGCAGGGTAGCTATGAGGAAGGGCCGCCGACACTGA CGGATTTACTCATTCGTGATCGTCGTTGGTGCCAAGGTAACTTGCAGCACGCAAAAATTGTTACCGCTGCTGGTCTGCAT TGGATCAGTCGTATGCATATGTTGATCGGTATTGGTCATTACTTCACTGCACCAATGTGGGGGCTGCTGATGTTGGTTGG CATCGCTATCCCTCTGGTTGGAGATGGTATTGATTTGACCGCAGGCATGCATTTTTCACCAGCACACTATTGGCATGGAC GTACAGATGGCGATGTATTGTGGATTTTTACCTTCACTATGTTTGTTCTTTTGGCACCAAAGCTGCTTGCTTACTTTGCC TTATTGTTTAAACCGTATGAACGTCGTGCTTGCGGTGGAGCATTGCGTGTATTGCTGAGTATTTTGCTGGAGAGCATTCT AGCGGCGTTGATGGCTCCTATTGTGATGTATTTGCAGTCGCGTGGCGTGTTTGAAGTGCTGGCTGGTAAAGATTCTGGCT GGGATGCACAGCAGCGTGATGATGGCAAGCTCTCTTGGAGTGTATTGCTGCGTAGCTACGGAGGTTTGAGCGTATTGGGT GTGTTGATCGGTGCATTGGCGTATACCGTTTCTCCGCCGCTAGCAATGTGGATGTCTCCAGTGGTGTTGGGGATGGCGTT CTCAGTGCCGGTCGTGGCATTGACCTCACACCGTCTTGTGGGTGCTGTGCTGCGTCGTTGGGGGATTTTTTTGATTCCAG AGGAAACAGCACCATCGAAGGTATTGATACGTGTCGCCGAACTTCGCCGCGCTAGGCAACCCTAA
Upstream 100 bases:
>100_bases TAGCCATGGTGTGGTGGGCATGCAGTATGCAGTGGGTGTGCGTGGTTTCACGGCAAGTAGATCGCCATGTGTCTCATGTT TGTCGTAAGTGCAAGCGTTG
Downstream 100 bases:
>100_bases TTTTTGAATCCCTCCTGTTTGGATATATATGCTGGAAACGATAGAGCACGAGACTGCCCCTATGCCGCAGTGGAGTGTGT TGTGGTTACATGGTTTGGGG
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MEMQIGASEVVQVLDTGCAVLPPESPLPMPEQSLRKGRLHVPRQRTAPLGIGLRRFYLIGGTMSMSLIATWVMLAVMWPG GINVLEGCLLVLFMFLFAWVTMSFASALAGFFCMVFGGGRKLGIDPQMPLPDLHTYTALLVPTYQEDPCRLLAGLQAIYE SLSETGQLEHFEFFVLSDSRREEFGLAEEREYAALCERLGAHGRIFYRRRADNTGRKAGNIADWVRRFGGAYQQMLILDA DSVMTGDTVVRLVAAMESNPDVGLIQSLPVVVGGRTLFARMQQFGACVYGPIIAYGVAWWHGAESNYWGHNAVIRTKAFA DHAGLPALPGRKPFGGHVLSHDFVEAALIRRGGWATHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKIVTAAGLH WISRMHMLIGIGHYFTAPMWGLLMLVGIAIPLVGDGIDLTAGMHFSPAHYWHGRTDGDVLWIFTFTMFVLLAPKLLAYFA LLFKPYERRACGGALRVLLSILLESILAALMAPIVMYLQSRGVFEVLAGKDSGWDAQQRDDGKLSWSVLLRSYGGLSVLG VLIGALAYTVSPPLAMWMSPVVLGMAFSVPVVALTSHRLVGAVLRRWGIFLIPEETAPSKVLIRVAELRRARQP
Sequences:
>Translated_634_residues MEMQIGASEVVQVLDTGCAVLPPESPLPMPEQSLRKGRLHVPRQRTAPLGIGLRRFYLIGGTMSMSLIATWVMLAVMWPG GINVLEGCLLVLFMFLFAWVTMSFASALAGFFCMVFGGGRKLGIDPQMPLPDLHTYTALLVPTYQEDPCRLLAGLQAIYE SLSETGQLEHFEFFVLSDSRREEFGLAEEREYAALCERLGAHGRIFYRRRADNTGRKAGNIADWVRRFGGAYQQMLILDA DSVMTGDTVVRLVAAMESNPDVGLIQSLPVVVGGRTLFARMQQFGACVYGPIIAYGVAWWHGAESNYWGHNAVIRTKAFA DHAGLPALPGRKPFGGHVLSHDFVEAALIRRGGWATHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKIVTAAGLH WISRMHMLIGIGHYFTAPMWGLLMLVGIAIPLVGDGIDLTAGMHFSPAHYWHGRTDGDVLWIFTFTMFVLLAPKLLAYFA LLFKPYERRACGGALRVLLSILLESILAALMAPIVMYLQSRGVFEVLAGKDSGWDAQQRDDGKLSWSVLLRSYGGLSVLG VLIGALAYTVSPPLAMWMSPVVLGMAFSVPVVALTSHRLVGAVLRRWGIFLIPEETAPSKVLIRVAELRRARQP >Mature_634_residues MEMQIGASEVVQVLDTGCAVLPPESPLPMPEQSLRKGRLHVPRQRTAPLGIGLRRFYLIGGTMSMSLIATWVMLAVMWPG GINVLEGCLLVLFMFLFAWVTMSFASALAGFFCMVFGGGRKLGIDPQMPLPDLHTYTALLVPTYQEDPCRLLAGLQAIYE SLSETGQLEHFEFFVLSDSRREEFGLAEEREYAALCERLGAHGRIFYRRRADNTGRKAGNIADWVRRFGGAYQQMLILDA DSVMTGDTVVRLVAAMESNPDVGLIQSLPVVVGGRTLFARMQQFGACVYGPIIAYGVAWWHGAESNYWGHNAVIRTKAFA DHAGLPALPGRKPFGGHVLSHDFVEAALIRRGGWATHMVPYLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKIVTAAGLH WISRMHMLIGIGHYFTAPMWGLLMLVGIAIPLVGDGIDLTAGMHFSPAHYWHGRTDGDVLWIFTFTMFVLLAPKLLAYFA LLFKPYERRACGGALRVLLSILLESILAALMAPIVMYLQSRGVFEVLAGKDSGWDAQQRDDGKLSWSVLLRSYGGLSVLG VLIGALAYTVSPPLAMWMSPVVLGMAFSVPVVALTSHRLVGAVLRRWGIFLIPEETAPSKVLIRVAELRRARQP
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787287, Length=615, Percent_Identity=37.7235772357724, Blast_Score=387, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 69952; Mature: 69952
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMQIGASEVVQVLDTGCAVLPPESPLPMPEQSLRKGRLHVPRQRTAPLGIGLRRFYLIG CCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHEEEC GTMSMSLIATWVMLAVMWPGGINVLEGCLLVLFMFLFAWVTMSFASALAGFFCMVFGGGR CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE KLGIDPQMPLPDLHTYTALLVPTYQEDPCRLLAGLQAIYESLSETGQLEHFEFFVLSDSR EECCCCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC REEFGLAEEREYAALCERLGAHGRIFYRRRADNTGRKAGNIADWVRRFGGAYQQMLILDA HHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHEEEECC DSVMTGDTVVRLVAAMESNPDVGLIQSLPVVVGGRTLFARMQQFGACVYGPIIAYGVAWW CCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHH HGAESNYWGHNAVIRTKAFADHAGLPALPGRKPFGGHVLSHDFVEAALIRRGGWATHMVP CCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH YLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKIVTAAGLHWISRMHMLIGIGHYFTAPMW HHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLMLVGIAIPLVGDGIDLTAGMHFSPAHYWHGRTDGDVLWIFTFTMFVLLAPKLLAYFA HHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH LLFKPYERRACGGALRVLLSILLESILAALMAPIVMYLQSRGVFEVLAGKDSGWDAQQRD HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC DGKLSWSVLLRSYGGLSVLGVLIGALAYTVSPPLAMWMSPVVLGMAFSVPVVALTSHRLV CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH GAVLRRWGIFLIPEETAPSKVLIRVAELRRARQP HHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MEMQIGASEVVQVLDTGCAVLPPESPLPMPEQSLRKGRLHVPRQRTAPLGIGLRRFYLIG CCCCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHEEEC GTMSMSLIATWVMLAVMWPGGINVLEGCLLVLFMFLFAWVTMSFASALAGFFCMVFGGGR CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE KLGIDPQMPLPDLHTYTALLVPTYQEDPCRLLAGLQAIYESLSETGQLEHFEFFVLSDSR EECCCCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC REEFGLAEEREYAALCERLGAHGRIFYRRRADNTGRKAGNIADWVRRFGGAYQQMLILDA HHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHEEEECC DSVMTGDTVVRLVAAMESNPDVGLIQSLPVVVGGRTLFARMQQFGACVYGPIIAYGVAWW CCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHH HGAESNYWGHNAVIRTKAFADHAGLPALPGRKPFGGHVLSHDFVEAALIRRGGWATHMVP CCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH YLQGSYEEGPPTLTDLLIRDRRWCQGNLQHAKIVTAAGLHWISRMHMLIGIGHYFTAPMW HHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLMLVGIAIPLVGDGIDLTAGMHFSPAHYWHGRTDGDVLWIFTFTMFVLLAPKLLAYFA HHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH LLFKPYERRACGGALRVLLSILLESILAALMAPIVMYLQSRGVFEVLAGKDSGWDAQQRD HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC DGKLSWSVLLRSYGGLSVLGVLIGALAYTVSPPLAMWMSPVVLGMAFSVPVVALTSHRLV CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH GAVLRRWGIFLIPEETAPSKVLIRVAELRRARQP HHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]