| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is yehU [H]
Identifier: 182681769
GI number: 182681769
Start: 1361025
End: 1362050
Strand: Reverse
Name: yehU [H]
Synonym: XfasM23_1227
Alternate gene names: 182681769
Gene position: 1362050-1361025 (Counterclockwise)
Preceding gene: 182681770
Following gene: 182681768
Centisome position: 53.72
GC content: 51.56
Gene sequence:
>1026_bases ATGTTGCGTCCGTCTTGGTTGCCGGAGATGTGCCGGGTCCCACGCATTGTGGTATTGCTAGGATTGGCTGAACTTGTTGT TGTGGTTGCGATGTTGGTGCCTGATCGGGGCAGCGTGTGGTCTGTCTCTCGTTTCCTGTCAGCAAGCGGTATGGCAATGT GGTTAGCGTTGGTGATTGGCGTGCTCTTATGTGTCTTGCGTCCGTTACTGTTACGTCTTTCTCCGATGTTGGGTAAGTTC GCGGTGTTGATGGTGGTCAGTACAGTAACCATGTTGGGAACTGGTGTTATGCATGTGTTGTATGTTTCCCTTGGTCAGCG GCCTATCGCGCCTGAGGTAGGATTTTGGCGTTATACCTTGGGATGTAGCGCCATCACACTACTGATCACAGTTTTGGTGC TCCACTATTTTTATGTCAATGATCGTTGGGTTGCCCAACTACAGGCGCATGCCCGTGCAGAGGTGAATGCCTTACAGGCA CGCATCCGCCCCCATTTTCTTTTTAATAGCATGAATCTGATTGCTTGCTTGCTGCGCCGTGATCCGGAAATTGCGGAGCA GGCAGTATTAGATTTGTGCGATCTGTTCCGTGCTGCTCTTGATGCGGGGGAGCGCGAGTCTAATTTGCGTGAAGAGTGCG AATTGGCCGAGCGTTATCTTGCGATTGAATCATTACGTTTGGGTGACCGATTGCAGGTACGTTGGAAACGTTTTGAGCCG CTGCCATGGCAGTTACCGTTGCCGCGTTTGGTGTTGCAACCGTTATTGGAAAACGCCATTTTGCATGGCATTTCCCAGTT ACCTTCCGGTGGCTGTGTGGAGGTAAGCATATGTTGCGAAGCGCAGCGTTTATATATCCGTATTGTGAATCCGGCACCGT CTCCACAGCGGCTGGCTGCAGGAGCAGGGCATGCACAGGCCAGCATTGCGCATCGTCTTGGTTACCGCTTTGGTCCTGAT GCTCGAATGACGGGGTTTTGGAGTGGAGGTTACTATTCCTGCGATATCGTATTGCCGTTGATATGA
Upstream 100 bases:
>100_bases CATCAGGTTTGCCAAGAGGAGATCCAGGCCTTGGGAGACTGGTTAGAGCGCCGTTTTGCGATTTCTTCTTAACTGAGCTG CTTTTGTGCCGCAATCATTG
Downstream 100 bases:
>100_bases TAGGGTTGATTGGGAGGTTTTCAGTTTGCTGCGTATATTGATTGCCGATGATGAGCCGCTTGCGCGTGAGCGGCTGCGTG TGTTGCTGCAAGCACAAATG
Product: histidine kinase internal region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MLRPSWLPEMCRVPRIVVLLGLAELVVVVAMLVPDRGSVWSVSRFLSASGMAMWLALVIGVLLCVLRPLLLRLSPMLGKF AVLMVVSTVTMLGTGVMHVLYVSLGQRPIAPEVGFWRYTLGCSAITLLITVLVLHYFYVNDRWVAQLQAHARAEVNALQA RIRPHFLFNSMNLIACLLRRDPEIAEQAVLDLCDLFRAALDAGERESNLREECELAERYLAIESLRLGDRLQVRWKRFEP LPWQLPLPRLVLQPLLENAILHGISQLPSGGCVEVSICCEAQRLYIRIVNPAPSPQRLAAGAGHAQASIAHRLGYRFGPD ARMTGFWSGGYYSCDIVLPLI
Sequences:
>Translated_341_residues MLRPSWLPEMCRVPRIVVLLGLAELVVVVAMLVPDRGSVWSVSRFLSASGMAMWLALVIGVLLCVLRPLLLRLSPMLGKF AVLMVVSTVTMLGTGVMHVLYVSLGQRPIAPEVGFWRYTLGCSAITLLITVLVLHYFYVNDRWVAQLQAHARAEVNALQA RIRPHFLFNSMNLIACLLRRDPEIAEQAVLDLCDLFRAALDAGERESNLREECELAERYLAIESLRLGDRLQVRWKRFEP LPWQLPLPRLVLQPLLENAILHGISQLPSGGCVEVSICCEAQRLYIRIVNPAPSPQRLAAGAGHAQASIAHRLGYRFGPD ARMTGFWSGGYYSCDIVLPLI >Mature_341_residues MLRPSWLPEMCRVPRIVVLLGLAELVVVVAMLVPDRGSVWSVSRFLSASGMAMWLALVIGVLLCVLRPLLLRLSPMLGKF AVLMVVSTVTMLGTGVMHVLYVSLGQRPIAPEVGFWRYTLGCSAITLLITVLVLHYFYVNDRWVAQLQAHARAEVNALQA RIRPHFLFNSMNLIACLLRRDPEIAEQAVLDLCDLFRAALDAGERESNLREECELAERYLAIESLRLGDRLQVRWKRFEP LPWQLPLPRLVLQPLLENAILHGISQLPSGGCVEVSICCEAQRLYIRIVNPAPSPQRLAAGAGHAQASIAHRLGYRFGPD ARMTGFWSGGYYSCDIVLPLI
Specific function: Unknown
COG id: COG2972
COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788446, Length=170, Percent_Identity=38.8235294117647, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1788723, Length=148, Percent_Identity=34.4594594594595, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR010559 - InterPro: IPR011620 [H]
Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]
EC number: NA
Molecular weight: Translated: 38056; Mature: 38056
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPSWLPEMCRVPRIVVLLGLAELVVVVAMLVPDRGSVWSVSRFLSASGMAMWLALVIG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHH VLLCVLRPLLLRLSPMLGKFAVLMVVSTVTMLGTGVMHVLYVSLGQRPIAPEVGFWRYTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH GCSAITLLITVLVLHYFYVNDRWVAQLQAHARAEVNALQARIRPHFLFNSMNLIACLLRR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPEIAEQAVLDLCDLFRAALDAGERESNLREECELAERYLAIESLRLGDRLQVRWKRFEP CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC LPWQLPLPRLVLQPLLENAILHGISQLPSGGCVEVSICCEAQRLYIRIVNPAPSPQRLAA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHC GAGHAQASIAHRLGYRFGPDARMTGFWSGGYYSCDIVLPLI CCCHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEEECC >Mature Secondary Structure MLRPSWLPEMCRVPRIVVLLGLAELVVVVAMLVPDRGSVWSVSRFLSASGMAMWLALVIG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHH VLLCVLRPLLLRLSPMLGKFAVLMVVSTVTMLGTGVMHVLYVSLGQRPIAPEVGFWRYTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH GCSAITLLITVLVLHYFYVNDRWVAQLQAHARAEVNALQARIRPHFLFNSMNLIACLLRR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPEIAEQAVLDLCDLFRAALDAGERESNLREECELAERYLAIESLRLGDRLQVRWKRFEP CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC LPWQLPLPRLVLQPLLENAILHGISQLPSGGCVEVSICCEAQRLYIRIVNPAPSPQRLAA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHC GAGHAQASIAHRLGYRFGPDARMTGFWSGGYYSCDIVLPLI CCCHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]