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The map label for this gene is nohA [C]

Identifier: 182681716

GI number: 182681716

Start: 1316516

End: 1317049

Strand: Reverse

Name: nohA [C]

Synonym: XfasM23_1174

Alternate gene names: 182681716

Gene position: 1317049-1316516 (Counterclockwise)

Preceding gene: 182681717

Following gene: 182681715

Centisome position: 51.94

GC content: 55.62

Gene sequence:

>534_bases
ATGGTTTTACAGAAACAGCAAGGAAAACAGGTTAATCGTGCAGGCCTTTCGGAGATATTCGGTGTAGCGTTGCCGACGGT
TGATCAATGGGCACGTAACGGCTGCCCAGTCGTGAAACGCGGTGGACGTGGGCGGGAATGGACGTTTGACACGGCTGTAG
TCGCCCGCTGGTTACGTGACAAAGCCGCAGAAGAAGCGGCGGGTGGGGCGGTGGCCGATATTGAAGAATGGAAGCGCCGT
AAGATCGCCGCTGAAGCGCAACGCGAAGAGTTGCACTTGGCCGATGCAAAAAAGCAGGTTGCTCCTTTGGAGCAGGTGGA
AAAGACATTGGCCCGCGTATTCGCGGAAGTGCGTGCCAACCTACGCACTATTCCAGGGCGGACCGTCGCCCTCCTACTGG
GTGAAACCGACGAGCGCCGATACAAACGCGTACTGCTGCAAGAAATCGACCAAACCTTAGAAAATCTCGCGTCCTTAGAC
CTAACCCAAGAAGACACGGACTCCGACGAAGACGAGGAAACAGACGATGTCTGA

Upstream 100 bases:

>100_bases
CACGGGTCCTTCCTGATGTGGGAGGCCTGCGGGGTCGAAACTCCGCGGGGCTTCCATTGTGCGTGGTGTTTTGATTCTCA
CTTGTTGTTTATATCGACCG

Downstream 100 bases:

>100_bases
AACCTTAGGTATAGCCGCCCTAGAAAACCAAGAAGGCGTTGATCAGATGATCAGCAACGCCTTACAGATGCTGCGACCGC
CCCCAGCAATGAAGCCTTCC

Product: DNA packaging Nu1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGGAVADIEEWKRR
KIAAEAQREELHLADAKKQVAPLEQVEKTLARVFAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD
LTQEDTDSDEDEETDDV

Sequences:

>Translated_177_residues
MVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGGAVADIEEWKRR
KIAAEAQREELHLADAKKQVAPLEQVEKTLARVFAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD
LTQEDTDSDEDEETDDV
>Mature_177_residues
MVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEAAGGAVADIEEWKRR
KIAAEAQREELHLADAKKQVAPLEQVEKTLARVFAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLD
LTQEDTDSDEDEETDDV

Specific function: Unknown

COG id: COG4220

COG function: function code L; Phage DNA packaging protein, Nu1 subunit of terminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19878; Mature: 19878

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRD
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHH
KAAEEAAGGAVADIEEWKRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARVFAEVRAN
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLDLTQEDTDSDEDEETDDV
HHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRD
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHH
KAAEEAAGGAVADIEEWKRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARVFAEVRAN
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLDLTQEDTDSDEDEETDDV
HHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA