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The map label for this gene is yceD [H]

Identifier: 182681656

GI number: 182681656

Start: 1262365

End: 1262874

Strand: Reverse

Name: yceD [H]

Synonym: XfasM23_1114

Alternate gene names: 182681656

Gene position: 1262874-1262365 (Counterclockwise)

Preceding gene: 182681657

Following gene: 182681655

Centisome position: 49.8

GC content: 50.78

Gene sequence:

>510_bases
ATGCTTGAAAACGTGCCAGAGTGGCTAGATGTTTGGCGCACTGTTGCTGCCCGTGGGCGTTTTGGAGGGCAGATTCCCCT
AAATAAGATGCAGCGGCTTAGGGATGCGTTACTCGATAGCGAAGGTGAGTGTGCTTACCTACTTGAGTTCGGTTACGATG
AAGAACTGCGAGCGGCTTATGTGGCTTTGACTGTGGAAGCGCAGTTGCCGCTTGAATGTCAGCGAAGCTTGAGGCGTTTT
CTGTTTCCAGTGCGTGTTGTCCAGCGCATTGGCCTAATTCGCAGTGAGGCTGAGGAGTCTACACTCCCCCCGGATTACGA
GGTATTTCTTGTGCCTAGTGATGCCGTGTTGCGGCCTGCTGATCTTGTTGAGGATGAGCTGTTGTTAGCAATCCCATTGG
TGCCAGTGGCCCCAGATACAGAAGCAGTGGAAACCAAATGGCCACCTATTGATCTAGAAACGAATAAGATCAATCCGTTT
GCAGTGTTGGCTTCGTTTAAGAAGCAATAG

Upstream 100 bases:

>100_bases
GGTTTTTCACCACGCTAGTTTGCAGGCCAGAATTGCCCTGATTTGACAATACTTGCCTCTATCCTTAGGATTCGGTTCCT
CATGCTTGAACCCTGACCTC

Downstream 100 bases:

>100_bases
TCATCGTGAAAGGTTTAGGGCAGAAAATGAATTTGAGGCGTATTTGAATTTGATACGTGTTTTTTTCTGTGCAATGAAAC
AATTAAAGTAATAGCAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: G30K [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MLENVPEWLDVWRTVAARGRFGGQIPLNKMQRLRDALLDSEGECAYLLEFGYDEELRAAYVALTVEAQLPLECQRSLRRF
LFPVRVVQRIGLIRSEAEESTLPPDYEVFLVPSDAVLRPADLVEDELLLAIPLVPVAPDTEAVETKWPPIDLETNKINPF
AVLASFKKQ

Sequences:

>Translated_169_residues
MLENVPEWLDVWRTVAARGRFGGQIPLNKMQRLRDALLDSEGECAYLLEFGYDEELRAAYVALTVEAQLPLECQRSLRRF
LFPVRVVQRIGLIRSEAEESTLPPDYEVFLVPSDAVLRPADLVEDELLLAIPLVPVAPDTEAVETKWPPIDLETNKINPF
AVLASFKKQ
>Mature_169_residues
MLENVPEWLDVWRTVAARGRFGGQIPLNKMQRLRDALLDSEGECAYLLEFGYDEELRAAYVALTVEAQLPLECQRSLRRF
LFPVRVVQRIGLIRSEAEESTLPPDYEVFLVPSDAVLRPADLVEDELLLAIPLVPVAPDTEAVETKWPPIDLETNKINPF
AVLASFKKQ

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0159 [H]

Homologues:

Organism=Escherichia coli, GI1787329, Length=173, Percent_Identity=31.2138728323699, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 19162; Mature: 19162

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENVPEWLDVWRTVAARGRFGGQIPLNKMQRLRDALLDSEGECAYLLEFGYDEELRAAY
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHEEE
VALTVEAQLPLECQRSLRRFLFPVRVVQRIGLIRSEAEESTLPPDYEVFLVPSDAVLRPA
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCH
DLVEDELLLAIPLVPVAPDTEAVETKWPPIDLETNKINPFAVLASFKKQ
HHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLENVPEWLDVWRTVAARGRFGGQIPLNKMQRLRDALLDSEGECAYLLEFGYDEELRAAY
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHEEE
VALTVEAQLPLECQRSLRRFLFPVRVVQRIGLIRSEAEESTLPPDYEVFLVPSDAVLRPA
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCH
DLVEDELLLAIPLVPVAPDTEAVETKWPPIDLETNKINPFAVLASFKKQ
HHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]