| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681576
Identifier: 182681576
GI number: 182681576
Start: 1184496
End: 1185479
Strand: Reverse
Name: 182681576
Synonym: XfasM23_1034
Alternate gene names: NA
Gene position: 1185479-1184496 (Counterclockwise)
Preceding gene: 182681577
Following gene: 182681575
Centisome position: 46.75
GC content: 57.62
Gene sequence:
>984_bases ATGAACATGATTGACATACGCCGCCGTCAGATAGCCGATGCGTTGAACCCGATGTTGCTGACCGATGCACGGTATCAGAC CTGTGATGCCACCCAAGCGCTGGCGTTTTTGGTGTCGCAACTGACCCATGTTGAATCGACGATCTACGCCCGCCAGCGCC AAGGCATCCAGTACCGGGATTTGGTGCCCATCAGCACCGAAGCGTGCGAGTACGCCACCTCGGTGACCTATCAAATGTAT GACTATTCCGGACGGGGCAAGCGGCATTCTGGACGGGGCGAAGATATTCCGACGGTCGATGTGGCCTACGCACAAAAGAG CGTGCCTGTCGTGTTGGGCACCATTGGCTACGATTACACCACCGAGGAACTGCGCCAATCGGCCTTTCTGCGTAAACCCC TCAACACCGCGCGGGCCGATGCGGCGATGGATGCCTATGAGCGCCATATCAACGATGTGGCGTTGTTTGGTGAGGACGAA CTCACCGGCCTGTATACCCATCCTGGCGTGCCGGTCCTGTTGAACACCGCCGGACCTTGGATCGGTCAATCGCCCGCCCA GGTGCTAGCCTTGTTCAACGCCCTGATCTCCAGCGCTTGGATGAACACCCACTATGTGGAGATGATCGATACCGTCCTGT TGCCCGGTAGCGTCATGAACTATCTCGTCTCCACCCCGCGCAGTGACAACAGCGATAAAACCATTCTGCATTACGTGCTG GAAAACAACATTGCCAAAGCCGAGCGTGGCCTTGATCTGACGGTCCGCACCGGCTACGGCTTAGAGACGGCAGGGGAAGG CGGCACGACCCGCGCCATGGTGTATACCAAGCACCCGACCAAGCTGGTGCTGCATCTGCCCATGCCGATCCGGTTTTTGC CCCCGCAACCCAAGGGCCTGAAGTTTGATATTCCAGGTGAATACAAATACAGCGGCGTGGAGTTCCGTTATCCCAAGTCC GCCCTGTATGCCGACGGCATTTGA
Upstream 100 bases:
>100_bases CATCGCTTCAGACACCATTCCCTACCCCCAGGCCATCTGGGATAGCACGAGCGCCCCCGGAGCGCTGGGCGTAATCCGCA TTCTTAAATAAGGGACCTGC
Downstream 100 bases:
>100_bases GTCTGAGGCCACACACATGACACCAGCGCCCTGAGGCGCTTTTTTTTTTGGAGAACGCAGCACCATGACCACGATCATGC TCAAGAACACCCGCAGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Exported Phage Protein
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRDLVPISTEACEYATSVTYQMY DYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYTTEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDE LTGLYTHPGVPVLLNTAGPWIGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMVYTKHPTKLVLHLPMPIRFLPPQPKGLKFDIPGEYKYSGVEFRYPKS ALYADGI
Sequences:
>Translated_327_residues MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRDLVPISTEACEYATSVTYQMY DYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYTTEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDE LTGLYTHPGVPVLLNTAGPWIGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMVYTKHPTKLVLHLPMPIRFLPPQPKGLKFDIPGEYKYSGVEFRYPKS ALYADGI >Mature_327_residues MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRDLVPISTEACEYATSVTYQMY DYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYTTEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDE LTGLYTHPGVPVLLNTAGPWIGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMVYTKHPTKLVLHLPMPIRFLPPQPKGLKFDIPGEYKYSGVEFRYPKS ALYADGI
Specific function: Unknown
COG id: COG4834
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36438; Mature: 36438
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRD CCCHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LVPISTEACEYATSVTYQMYDYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYT CCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCC TEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDELTGLYTHPGVPVLLNTAGPW HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCEEEECCCCC IGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHEEHHHH ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMVYTKHPTKLVLHLPMPIRFLPPQPKGL HCCHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCCE KFDIPGEYKYSGVEFRYPKSALYADGI EEECCCCCEECCEEEECCCCCCCCCCC >Mature Secondary Structure MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRD CCCHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LVPISTEACEYATSVTYQMYDYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYT CCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCC TEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDELTGLYTHPGVPVLLNTAGPW HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCEEEECCCCC IGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHEEHHHH ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMVYTKHPTKLVLHLPMPIRFLPPQPKGL HCCHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCCE KFDIPGEYKYSGVEFRYPKSALYADGI EEECCCCCEECCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA