| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681573
Identifier: 182681573
GI number: 182681573
Start: 1183282
End: 1183761
Strand: Reverse
Name: 182681573
Synonym: XfasM23_1031
Alternate gene names: NA
Gene position: 1183761-1183282 (Counterclockwise)
Preceding gene: 182681574
Following gene: 182681572
Centisome position: 46.68
GC content: 64.17
Gene sequence:
>480_bases ATGAGTGCGGTCACGATCCTTCGGCCCGCCGATCCCAACACGTGGAAGGCCCTGGCGCAGCGGCTGCACGCGATGGCGCA GCGCTGTGTCGTGGTGGGCATTCCTGCCGCGCACAACGCACGGACGGAAGACGGGATCGGCTCGGCTGGACTGTTGGCGG TGCATGAATTGGGTGCGCCAGAGCGGGGCATTCCGGAGCGCTCCGTGGTGCGGCGTTCCATCAGCGAGCATCAAGACAAC TATGTGGCCCTGCACAGGCAGCACCTGCGCGCAGTGCTGCGTGATGCGATGACCGTAGAAACCGCCCTGAACCTGCTAGG GACGGTGGCCGCCGGTGATGTCAAGGCGACGATTCGTCACGCGGACTTACCGCCGCTGAGGCAACAGACCATTCAGCGCA AAGGCTCCAGCGCCCCGCTGATTGACACCGGGCAGATGCTCCAGTCGATCACCTATGAGGTGCGCGATGCTGAAGATTAG
Upstream 100 bases:
>100_bases CCTCTGACAGTGCCAGTGACGCTTGGCTCGCCACCTCGGTGTATGGACAACGTTACCTGACGCTGCGTCGGATGATCGGC CTGGGGGCCTTGGTCGCCCC
Downstream 100 bases:
>100_bases CGCGCTGTTTGGCAATCCACGCTTTGCCCAGACCGTCACGGTACACCGTGACCACGGGCACTATCGCGCCGATGGCACCT GGATCCAGGCCAGCGTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSAVTILRPADPNTWKALAQRLHAMAQRCVVVGIPAAHNARTEDGIGSAGLLAVHELGAPERGIPERSVVRRSISEHQDN YVALHRQHLRAVLRDAMTVETALNLLGTVAAGDVKATIRHADLPPLRQQTIQRKGSSAPLIDTGQMLQSITYEVRDAED
Sequences:
>Translated_159_residues MSAVTILRPADPNTWKALAQRLHAMAQRCVVVGIPAAHNARTEDGIGSAGLLAVHELGAPERGIPERSVVRRSISEHQDN YVALHRQHLRAVLRDAMTVETALNLLGTVAAGDVKATIRHADLPPLRQQTIQRKGSSAPLIDTGQMLQSITYEVRDAED >Mature_158_residues SAVTILRPADPNTWKALAQRLHAMAQRCVVVGIPAAHNARTEDGIGSAGLLAVHELGAPERGIPERSVVRRSISEHQDNY VALHRQHLRAVLRDAMTVETALNLLGTVAAGDVKATIRHADLPPLRQQTIQRKGSSAPLIDTGQMLQSITYEVRDAED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17261; Mature: 17130
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVTILRPADPNTWKALAQRLHAMAQRCVVVGIPAAHNARTEDGIGSAGLLAVHELGAP CCCEEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHCCCC ERGIPERSVVRRSISEHQDNYVALHRQHLRAVLRDAMTVETALNLLGTVAAGDVKATIRH CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC ADLPPLRQQTIQRKGSSAPLIDTGQMLQSITYEVRDAED CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SAVTILRPADPNTWKALAQRLHAMAQRCVVVGIPAAHNARTEDGIGSAGLLAVHELGAP CCEEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHCCCC ERGIPERSVVRRSISEHQDNYVALHRQHLRAVLRDAMTVETALNLLGTVAAGDVKATIRH CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC ADLPPLRQQTIQRKGSSAPLIDTGQMLQSITYEVRDAED CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA