| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681520
Identifier: 182681520
GI number: 182681520
Start: 1135906
End: 1136301
Strand: Reverse
Name: 182681520
Synonym: XfasM23_0974
Alternate gene names: NA
Gene position: 1136301-1135906 (Counterclockwise)
Preceding gene: 182681532
Following gene: 182681519
Centisome position: 44.81
GC content: 39.65
Gene sequence:
>396_bases ATGAACGTAAATCTACTACTCGATAAATCAAAAGAGATATGTAAAGCAAATTCAGACAGTGAATTAGCCAACAAATTAGG AATATCTAAACAAGCGATATCAAGCTACCGCAAAGGAACACGCCTACCAGACGCAGTGATATGCGAAGCATTAGCAGAAA TAACAGAATTACCACTAACTAAAGTGCTAGGAATCGTTGGAGAAGCACGCGCAATAAGCAGAGAAGAAAAAGCAGTCTGG CGAAAACTAGCAACACTAGCAGCAGCAACACTAATGATAGGAACAGGTATCACCTACCCCAACAGATCTCAAGCACAGTC AATATGTGAAAATTCAGTAATGAAATTTCAGATAATGCATATTATGTCCGCTGGAGAAGATGGGTACGAGAACTAG
Upstream 100 bases:
>100_bases GATAGGATGAATGGGAAGGTGGGTACACTCGGTGTACTCATCCCGAGGACTAAACATGTTGTACTCTGGGTGAGGACTGA TGTCAACAGGGTGAGTACTC
Downstream 100 bases:
>100_bases CAATTAGTCTCAAAAAGAGACATACAGGGACACCACTAGCGCACGCACAATGACTAGCAATGAGATTCCAAATCAAAAAC TAACAGGAAACTGGACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MNVNLLLDKSKEICKANSDSELANKLGISKQAISSYRKGTRLPDAVICEALAEITELPLTKVLGIVGEARAISREEKAVW RKLATLAAATLMIGTGITYPNRSQAQSICENSVMKFQIMHIMSAGEDGYEN
Sequences:
>Translated_131_residues MNVNLLLDKSKEICKANSDSELANKLGISKQAISSYRKGTRLPDAVICEALAEITELPLTKVLGIVGEARAISREEKAVW RKLATLAAATLMIGTGITYPNRSQAQSICENSVMKFQIMHIMSAGEDGYEN >Mature_131_residues MNVNLLLDKSKEICKANSDSELANKLGISKQAISSYRKGTRLPDAVICEALAEITELPLTKVLGIVGEARAISREEKAVW RKLATLAAATLMIGTGITYPNRSQAQSICENSVMKFQIMHIMSAGEDGYEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14258; Mature: 14258
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVNLLLDKSKEICKANSDSELANKLGISKQAISSYRKGTRLPDAVICEALAEITELPLT CCCCEEECCCHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHH KVLGIVGEARAISREEKAVWRKLATLAAATLMIGTGITYPNRSQAQSICENSVMKFQIMH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH IMSAGEDGYEN HHHCCCCCCCC >Mature Secondary Structure MNVNLLLDKSKEICKANSDSELANKLGISKQAISSYRKGTRLPDAVICEALAEITELPLT CCCCEEECCCHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHH KVLGIVGEARAISREEKAVWRKLATLAAATLMIGTGITYPNRSQAQSICENSVMKFQIMH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH IMSAGEDGYEN HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA