| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is resA [H]
Identifier: 182681416
GI number: 182681416
Start: 1016575
End: 1017126
Strand: Direct
Name: resA [H]
Synonym: XfasM23_0866
Alternate gene names: 182681416
Gene position: 1016575-1017126 (Clockwise)
Preceding gene: 182681415
Following gene: 182681417
Centisome position: 40.09
GC content: 53.8
Gene sequence:
>552_bases ATGAACTTACGTGTGTTGGGTGTCGTTTACGCGGTGTTGTGCGTTGTTTGCCCGGGCTTGCTTGAAGCATCGGCTGTGTC TGCTGTGCAGAAGGTGTCCAGCGCAGGGGTTGCAGATCCTGCCACGCAGCAGCGCATGGCTCACCGTCCGAGATTGCAGG GGAAGACGGTCATTGGCAAACCATACGATCTGGCTGCGCATCGTGGTAAGTGGGTATTGGTGAATGTATGGGCTACGTGG TGTGAGCCATGTTTGAAGGAGATGCCCGAGTTGTCGGCGTTATACCGGCGGCGGAGGGACGTTGAAGTGGTTGGACTTGC TTACGAGGACAGTACGCCGGAGGAGATTCTGACGTTCTTACGGTCGCATCCTGTTGCTTATCCGATCATTCTCGTTGATG TTTCGAACCCTCCTAAAGATTTCGCGGTGCCGCGTGGTTTGCCAATGAGTTATTTAATTGCTCCTGATGGTACTGTCGCT AAGCAATTCCTTGGTTCGATTACCGCTCGGGATGTTGAAGGAGTGATCGGCACAATGGGTAAGGCCGGTTGA
Upstream 100 bases:
>100_bases GCAGTGGTTGTTTGTATTATTTGGTTTGGGACGATGGAAGCATCGTATTATTCGACCATTGTATGGTGAATGGTCTCTGT CAATGCTGTGGAGATACTGT
Downstream 100 bases:
>100_bases TGGCTCGGTGTGTTTCTTGTGGATTGTTGCGGTGTAGTGCTTGGATGCCGTCCTCTCTATGTGTGCATGTTGCCGCGAAG GCCAAGGATGGCATGGAATT
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MNLRVLGVVYAVLCVVCPGLLEASAVSAVQKVSSAGVADPATQQRMAHRPRLQGKTVIGKPYDLAAHRGKWVLVNVWATW CEPCLKEMPELSALYRRRRDVEVVGLAYEDSTPEEILTFLRSHPVAYPIILVDVSNPPKDFAVPRGLPMSYLIAPDGTVA KQFLGSITARDVEGVIGTMGKAG
Sequences:
>Translated_183_residues MNLRVLGVVYAVLCVVCPGLLEASAVSAVQKVSSAGVADPATQQRMAHRPRLQGKTVIGKPYDLAAHRGKWVLVNVWATW CEPCLKEMPELSALYRRRRDVEVVGLAYEDSTPEEILTFLRSHPVAYPIILVDVSNPPKDFAVPRGLPMSYLIAPDGTVA KQFLGSITARDVEGVIGTMGKAG >Mature_183_residues MNLRVLGVVYAVLCVVCPGLLEASAVSAVQKVSSAGVADPATQQRMAHRPRLQGKTVIGKPYDLAAHRGKWVLVNVWATW CEPCLKEMPELSALYRRRRDVEVVGLAYEDSTPEEILTFLRSHPVAYPIILVDVSNPPKDFAVPRGLPMSYLIAPDGTVA KQFLGSITARDVEGVIGTMGKAG
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 19839; Mature: 19839
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRVLGVVYAVLCVVCPGLLEASAVSAVQKVSSAGVADPATQQRMAHRPRLQGKTVIGK CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEECCC PYDLAAHRGKWVLVNVWATWCEPCLKEMPELSALYRRRRDVEVVGLAYEDSTPEEILTFL CHHHHHCCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHH RSHPVAYPIILVDVSNPPKDFAVPRGLPMSYLIAPDGTVAKQFLGSITARDVEGVIGTMG HHCCCEEEEEEEECCCCCHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC KAG CCC >Mature Secondary Structure MNLRVLGVVYAVLCVVCPGLLEASAVSAVQKVSSAGVADPATQQRMAHRPRLQGKTVIGK CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEECCC PYDLAAHRGKWVLVNVWATWCEPCLKEMPELSALYRRRRDVEVVGLAYEDSTPEEILTFL CHHHHHCCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHH RSHPVAYPIILVDVSNPPKDFAVPRGLPMSYLIAPDGTVAKQFLGSITARDVEGVIGTMG HHCCCEEEEEEEECCCCCHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC KAG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA