| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is ilvE [H]
Identifier: 182681408
GI number: 182681408
Start: 1007517
End: 1008605
Strand: Direct
Name: ilvE [H]
Synonym: XfasM23_0857
Alternate gene names: 182681408
Gene position: 1007517-1008605 (Clockwise)
Preceding gene: 182681407
Following gene: 182681411
Centisome position: 39.73
GC content: 54.91
Gene sequence:
>1089_bases GTGTCCATTTCGTTCGATATTGCCCGCTCATTGTCTACCACTTCTGATGAAGAGCTCTCTATGATCCTGCAAGCGCCAGG GTTCGGTGTTCATTTCACTGATCATATGATTGCTATCGCCTGGGATAAGGACAATGATTGGCACGACGCCCAGGTGCGCG CCTATGGGCCATTGTTGCTAGATCCTGCCGCTGCTGTGCTGCACTACGGGCAAGAGATTTTCGAAGGAATCAAAGCATAT CGCCATGCTGATGGTTCGATCTGGACGTTCCGCCCGGAGGCCAACGCTCGCCGCTTGCAGCGTTCGGCCAAACGATTAGT GCTGCCAGAGTTGCCGGTGGAACTGTTTACAGAATCTTTGCGTCAACTCATTGCAGTGGATGCCCGCTGGGTTCCTTCAG CACCAGAAACCAGCCTTTATTTTCGTCCCTTCATGATTGCCACAGAAGCGTACTTAGGCGTGCGTGCTGCGCAGCACGCC TCTTACTACCTGATCGCCAGCCCTGCTGGCCCGTATTTCGCTAAAGGCGTTACTCCCGTGTCGATCTGGTTGTCGACAGA CTGTGCCCGTGCTGCCCTAGGGGGCACGGGCGCGGTGAAGTGTGGTGGCAATTATGCCGCCTCCTTGCTGCCGCAACAGG TCGCGCAGACCCAGGGATGCTCTCAGGTACTGTTCCTTGATCCGGTTGAGGGCAAATACCTGGAGGAGCTGGGAGGGATG AATGTGTTTCTCGTCTACACAGACGGCACCTTGGTCACACCAGCGTTGTCTGGCAGCATCCTCGAAGGTATCACCCGCGA GAGTATCTTGCAGCTTGCTCGTGATCGAGGGATGTGTGTTGAGGAACGTAAGGTAGCAATTGAGGAGTGGAAAGAGGGCG TGGTTTCCGGTGCGATCAGCGAGGTATTCGCTTGCGGTACGGCTGCTGTGATCACTCCAATTGGTGAATTGAAAGCGGAG GGTTTTTCGGTCGGAAACATCAACGCACCACCTGGCGAAGTTACTCTGTCGTTGCGCAAGGAACTGACCGACATCCAGTA CGGCCGTTTGCCAGACCGTTATGGGTGGATGACGTGTTTGAAGGAATAA
Upstream 100 bases:
>100_bases GTTTTGAAATCTAGATTTCCCTGATCCGTTGCTGCCTGCTCCGATCCGTTGCTGCCTGCTCCTTCTGCCCTTTTGCTTCT GCTTCAACAGGAATTTTCTA
Downstream 100 bases:
>100_bases ATTACTTTCGCTTCCTATCCTTTTCGGTGACTTGATGCCGTTGGCTGGCTGCAATGCGGGCAATGCATGGGGGCTCTGCT GCTGCTCCCGTCTTTGTTCG
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MSISFDIARSLSTTSDEELSMILQAPGFGVHFTDHMIAIAWDKDNDWHDAQVRAYGPLLLDPAAAVLHYGQEIFEGIKAY RHADGSIWTFRPEANARRLQRSAKRLVLPELPVELFTESLRQLIAVDARWVPSAPETSLYFRPFMIATEAYLGVRAAQHA SYYLIASPAGPYFAKGVTPVSIWLSTDCARAALGGTGAVKCGGNYAASLLPQQVAQTQGCSQVLFLDPVEGKYLEELGGM NVFLVYTDGTLVTPALSGSILEGITRESILQLARDRGMCVEERKVAIEEWKEGVVSGAISEVFACGTAAVITPIGELKAE GFSVGNINAPPGEVTLSLRKELTDIQYGRLPDRYGWMTCLKE
Sequences:
>Translated_362_residues MSISFDIARSLSTTSDEELSMILQAPGFGVHFTDHMIAIAWDKDNDWHDAQVRAYGPLLLDPAAAVLHYGQEIFEGIKAY RHADGSIWTFRPEANARRLQRSAKRLVLPELPVELFTESLRQLIAVDARWVPSAPETSLYFRPFMIATEAYLGVRAAQHA SYYLIASPAGPYFAKGVTPVSIWLSTDCARAALGGTGAVKCGGNYAASLLPQQVAQTQGCSQVLFLDPVEGKYLEELGGM NVFLVYTDGTLVTPALSGSILEGITRESILQLARDRGMCVEERKVAIEEWKEGVVSGAISEVFACGTAAVITPIGELKAE GFSVGNINAPPGEVTLSLRKELTDIQYGRLPDRYGWMTCLKE >Mature_361_residues SISFDIARSLSTTSDEELSMILQAPGFGVHFTDHMIAIAWDKDNDWHDAQVRAYGPLLLDPAAAVLHYGQEIFEGIKAYR HADGSIWTFRPEANARRLQRSAKRLVLPELPVELFTESLRQLIAVDARWVPSAPETSLYFRPFMIATEAYLGVRAAQHAS YYLIASPAGPYFAKGVTPVSIWLSTDCARAALGGTGAVKCGGNYAASLLPQQVAQTQGCSQVLFLDPVEGKYLEELGGMN VFLVYTDGTLVTPALSGSILEGITRESILQLARDRGMCVEERKVAIEEWKEGVVSGAISEVFACGTAAVITPIGELKAEG FSVGNINAPPGEVTLSLRKELTDIQYGRLPDRYGWMTCLKE
Specific function: Catalyzes the reversible transfers of an amino group from glutamate to the alpha-ketoacid of the respective amino acid in the final step in the biosynthesis of branchedchain amino acids. The amino acids can be ranked in the following order with respect to
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=330, Percent_Identity=40.3030303030303, Blast_Score=231, Evalue=6e-61, Organism=Homo sapiens, GI296010906, Length=330, Percent_Identity=40.3030303030303, Blast_Score=231, Evalue=6e-61, Organism=Homo sapiens, GI38176287, Length=330, Percent_Identity=40.3030303030303, Blast_Score=231, Evalue=7e-61, Organism=Homo sapiens, GI50658084, Length=329, Percent_Identity=40.4255319148936, Blast_Score=225, Evalue=5e-59, Organism=Homo sapiens, GI258614015, Length=285, Percent_Identity=40.7017543859649, Blast_Score=188, Evalue=5e-48, Organism=Homo sapiens, GI296010902, Length=330, Percent_Identity=35.1515151515151, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI296010900, Length=330, Percent_Identity=35.1515151515151, Blast_Score=181, Evalue=6e-46, Organism=Escherichia coli, GI48994963, Length=325, Percent_Identity=31.3846153846154, Blast_Score=112, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17568601, Length=344, Percent_Identity=38.0813953488372, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17565728, Length=342, Percent_Identity=35.9649122807018, Blast_Score=192, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6322002, Length=338, Percent_Identity=41.1242603550296, Blast_Score=229, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6322608, Length=334, Percent_Identity=40.4191616766467, Blast_Score=226, Evalue=6e-60, Organism=Drosophila melanogaster, GI24641779, Length=347, Percent_Identity=39.193083573487, Blast_Score=216, Evalue=3e-56,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 39480; Mature: 39349
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISFDIARSLSTTSDEELSMILQAPGFGVHFTDHMIAIAWDKDNDWHDAQVRAYGPLLL CCCCHHHHHHCCCCCHHHHHHHEECCCCCEEECCCEEEEEECCCCCCCCCEEEEECCEEE DPAAAVLHYGQEIFEGIKAYRHADGSIWTFRPEANARRLQRSAKRLVLPELPVELFTESL CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHH RQLIAVDARWVPSAPETSLYFRPFMIATEAYLGVRAAQHASYYLIASPAGPYFAKGVTPV HHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCEE SIWLSTDCARAALGGTGAVKCGGNYAASLLPQQVAQTQGCSQVLFLDPVEGKYLEELGGM EEEEECCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCC NVFLVYTDGTLVTPALSGSILEGITRESILQLARDRGMCVEERKVAIEEWKEGVVSGAIS EEEEEEECCEEECCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EVFACGTAAVITPIGELKAEGFSVGNINAPPGEVTLSLRKELTDIQYGRLPDRYGWMTCL HHHHCCCHHHHCCHHHHHCCCEEECCCCCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHH KE CC >Mature Secondary Structure SISFDIARSLSTTSDEELSMILQAPGFGVHFTDHMIAIAWDKDNDWHDAQVRAYGPLLL CCCHHHHHHCCCCCHHHHHHHEECCCCCEEECCCEEEEEECCCCCCCCCEEEEECCEEE DPAAAVLHYGQEIFEGIKAYRHADGSIWTFRPEANARRLQRSAKRLVLPELPVELFTESL CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHH RQLIAVDARWVPSAPETSLYFRPFMIATEAYLGVRAAQHASYYLIASPAGPYFAKGVTPV HHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCEE SIWLSTDCARAALGGTGAVKCGGNYAASLLPQQVAQTQGCSQVLFLDPVEGKYLEELGGM EEEEECCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCC NVFLVYTDGTLVTPALSGSILEGITRESILQLARDRGMCVEERKVAIEEWKEGVVSGAIS EEEEEEECCEEECCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EVFACGTAAVITPIGELKAEGFSVGNINAPPGEVTLSLRKELTDIQYGRLPDRYGWMTCL HHHHCCCHHHHCCHHHHHCCCEEECCCCCCCCCEEHHHHHHHHHCCCCCCCCHHHHHHHH KE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA