| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681389
Identifier: 182681389
GI number: 182681389
Start: 991475
End: 992752
Strand: Direct
Name: 182681389
Synonym: XfasM23_0838
Alternate gene names: NA
Gene position: 991475-992752 (Clockwise)
Preceding gene: 182681384
Following gene: 182681390
Centisome position: 39.1
GC content: 42.49
Gene sequence:
>1278_bases ATGAAAAGAAAAGGTTATAAAAAAATAATATTGGCAACACTTATCTCCGTTTTATTGATAGGAAGTGCCGGTGCCGTTTA TGCAACTCAGCCATACGTATCAGAGAAGCTTATTTTGTCGGAGGAGACTGTGGATGCCATTTCCAATGCAATGTCCAGAG ATGGAAAGACCATGGCGTGGAATTATGATTTTACAGGGCCATCTGGTGCTTTCCCTTCCTCTTCCCAGTCCAATGCGACT ATACACTCAGGGAAAAATTGGAGCATAAAAACAAAAGTCAAGACATTAATATTTGGAAATTTAGGCAGATCTGAGATTTG GGCATTTTCTAACGATGGAAAAGTTGCCGCTGGATTTTCATCCTTTAAGAAAGAGGGAGGAGCATACATACACGCAACGA TCTGGTCAGAAAGAAATTGGGAGAACAAAACTGACCTAGGAACCTTAAGAAACGATAATGCAGGTAATTCTATTGTTTTC TCACTCTCTGCCGATGGGAAAATTGCTGCGGGAACTTCTGAATCAGCAACCCCCTTTCAACGTGCAACCATTTGGTCAGG TAACAATTGGGCGACAAAAACAGATCTTGGAACGCTAAGAAACGATAATTCTGGTGGTTCTTCTGTTAGTTCACTCTCTT CTGATCGGAAAATCGCTGCAGGAAACTCTGAGTCTGATCTTAAAGAAGATGTAACTAGTAATTTTTATCAACGCCCAGTC ATCTGGGCAGGTGATAATTGGGCAACGAAAATCGACGTCGGAACGTTAAGAAAAGATAATTTAGGAAAGGCCCAGATCAA TGCACTCTCTAATGATGGAAAAATTGCAGCAGGGACTTCTGAGATTGATACTGTTACCAAAGAGGTTTACCAACAAGCAA CCATCTGGTCAGGAGAAAACTGGGCAACAAAAACACGCTTAGGATCACTAAGAAGCGATAATTTAGGTAACTCGCAAGTG ATTGCACTTTCTGCTGATGGGAAGATCGCCGCCGGATATTCCGAAACTGACTCTAAAACCATTCATGCAATCATTTGGTC AGGGGAGAATTGGGAAACTAAAACGGATTTGGGAACATTTAAAAGTGATAATGCAGGATCATCCGGAATTGAGGCGCTCT CCGCTGATGGCACCATTGCCGTAGGATTTTCTTCAACGGATGCAAAAGGCCGACGTGCAGTTCTTTGGAAAATCATTTAT CCAGCAGCATCATCGGAAAGCGGATCAAATGCCCCAAACTCTGCTCACATTCACTTGCCGATGCAGCCAACACAGTAA
Upstream 100 bases:
>100_bases TGGATTATTATGAAATATTAGTCTCAAGATGATTACATATACATCTTAGTTATTTTTCAGAATCACTGATTGGAAGGCGC ACAATGCTCAAGGATATTTT
Downstream 100 bases:
>100_bases GCTCGTTATTGCGCTTGAATGCATCAAGCTTTTTACTCATAGAGTGACCTTGTTATAAGAGTGGCCCGCCTGCAGCAGCG CTGCAAATAGAGATAAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKRKGYKKIILATLISVLLIGSAGAVYATQPYVSEKLILSEETVDAISNAMSRDGKTMAWNYDFTGPSGAFPSSSQSNAT IHSGKNWSIKTKVKTLIFGNLGRSEIWAFSNDGKVAAGFSSFKKEGGAYIHATIWSERNWENKTDLGTLRNDNAGNSIVF SLSADGKIAAGTSESATPFQRATIWSGNNWATKTDLGTLRNDNSGGSSVSSLSSDRKIAAGNSESDLKEDVTSNFYQRPV IWAGDNWATKIDVGTLRKDNLGKAQINALSNDGKIAAGTSEIDTVTKEVYQQATIWSGENWATKTRLGSLRSDNLGNSQV IALSADGKIAAGYSETDSKTIHAIIWSGENWETKTDLGTFKSDNAGSSGIEALSADGTIAVGFSSTDAKGRRAVLWKIIY PAASSESGSNAPNSAHIHLPMQPTQ
Sequences:
>Translated_425_residues MKRKGYKKIILATLISVLLIGSAGAVYATQPYVSEKLILSEETVDAISNAMSRDGKTMAWNYDFTGPSGAFPSSSQSNAT IHSGKNWSIKTKVKTLIFGNLGRSEIWAFSNDGKVAAGFSSFKKEGGAYIHATIWSERNWENKTDLGTLRNDNAGNSIVF SLSADGKIAAGTSESATPFQRATIWSGNNWATKTDLGTLRNDNSGGSSVSSLSSDRKIAAGNSESDLKEDVTSNFYQRPV IWAGDNWATKIDVGTLRKDNLGKAQINALSNDGKIAAGTSEIDTVTKEVYQQATIWSGENWATKTRLGSLRSDNLGNSQV IALSADGKIAAGYSETDSKTIHAIIWSGENWETKTDLGTFKSDNAGSSGIEALSADGTIAVGFSSTDAKGRRAVLWKIIY PAASSESGSNAPNSAHIHLPMQPTQ >Mature_425_residues MKRKGYKKIILATLISVLLIGSAGAVYATQPYVSEKLILSEETVDAISNAMSRDGKTMAWNYDFTGPSGAFPSSSQSNAT IHSGKNWSIKTKVKTLIFGNLGRSEIWAFSNDGKVAAGFSSFKKEGGAYIHATIWSERNWENKTDLGTLRNDNAGNSIVF SLSADGKIAAGTSESATPFQRATIWSGNNWATKTDLGTLRNDNSGGSSVSSLSSDRKIAAGNSESDLKEDVTSNFYQRPV IWAGDNWATKIDVGTLRKDNLGKAQINALSNDGKIAAGTSEIDTVTKEVYQQATIWSGENWATKTRLGSLRSDNLGNSQV IALSADGKIAAGYSETDSKTIHAIIWSGENWETKTDLGTFKSDNAGSSGIEALSADGTIAVGFSSTDAKGRRAVLWKIIY PAASSESGSNAPNSAHIHLPMQPTQ
Specific function: Unknown
COG id: COG5563
COG function: function code S; Predicted integral membrane proteins containing uncharacterized repeats
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45319; Mature: 45319
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKGYKKIILATLISVLLIGSAGAVYATQPYVSEKLILSEETVDAISNAMSRDGKTMAW CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECHHHHHHHHHHHHCCCCEEEE NYDFTGPSGAFPSSSQSNATIHSGKNWSIKTKVKTLIFGNLGRSEIWAFSNDGKVAAGFS EECCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCCCHHEEEECCCCCEEECHH SFKKEGGAYIHATIWSERNWENKTDLGTLRNDNAGNSIVFSLSADGKIAAGTSESATPFQ HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCE RATIWSGNNWATKTDLGTLRNDNSGGSSVSSLSSDRKIAAGNSESDLKEDVTSNFYQRPV EEEEECCCCCEEECCCCCCCCCCCCCCHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCE IWAGDNWATKIDVGTLRKDNLGKAQINALSNDGKIAAGTSEIDTVTKEVYQQATIWSGEN EEECCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHEEECCCC WATKTRLGSLRSDNLGNSQVIALSADGKIAAGYSETDSKTIHAIIWSGENWETKTDLGTF CCHHHHHCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCC KSDNAGSSGIEALSADGTIAVGFSSTDAKGRRAVLWKIIYPAASSESGSNAPNSAHIHLP CCCCCCCCCCEEECCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEC MQPTQ CCCCC >Mature Secondary Structure MKRKGYKKIILATLISVLLIGSAGAVYATQPYVSEKLILSEETVDAISNAMSRDGKTMAW CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECHHHHHHHHHHHHCCCCEEEE NYDFTGPSGAFPSSSQSNATIHSGKNWSIKTKVKTLIFGNLGRSEIWAFSNDGKVAAGFS EECCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCCCHHEEEECCCCCEEECHH SFKKEGGAYIHATIWSERNWENKTDLGTLRNDNAGNSIVFSLSADGKIAAGTSESATPFQ HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCE RATIWSGNNWATKTDLGTLRNDNSGGSSVSSLSSDRKIAAGNSESDLKEDVTSNFYQRPV EEEEECCCCCEEECCCCCCCCCCCCCCHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCE IWAGDNWATKIDVGTLRKDNLGKAQINALSNDGKIAAGTSEIDTVTKEVYQQATIWSGEN EEECCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHEEECCCC WATKTRLGSLRSDNLGNSQVIALSADGKIAAGYSETDSKTIHAIIWSGENWETKTDLGTF CCHHHHHCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCC KSDNAGSSGIEALSADGTIAVGFSSTDAKGRRAVLWKIIYPAASSESGSNAPNSAHIHLP CCCCCCCCCCEEECCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEC MQPTQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA