| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681383
Identifier: 182681383
GI number: 182681383
Start: 984254
End: 985210
Strand: Direct
Name: 182681383
Synonym: XfasM23_0831
Alternate gene names: NA
Gene position: 984254-985210 (Clockwise)
Preceding gene: 182681382
Following gene: 182681384
Centisome position: 38.82
GC content: 55.38
Gene sequence:
>957_bases ATGCCAGATCATTCTCATAGGTTGCTGACCGTTGCGGTGACTTCACGTGCCTTGTTCGATCTCGAAGAGGGGCATGCCTT GTTTGAGCGCGATGGTGTCGATGCGTATGCTCACTATCAACGCGCACATGAGGATGATGTCCTACAACCTGGTGTCGCGT TCCCCGTCGTCCGTAAGTTACTGGCATTGAATTGGGGAGAAGGGGGCGATATTCCGCGGGTTGAGGTGATTTTGTTGTCG CGTAATTCTGCTGACACTGGCTTGCGTATCTTCAATTCCATTCAGCACTACGGTCTTGGAATTGTTCGTGCCACTTTCAC CTCTGGTGAGGCGACATGGCCTTATGTCAAACCCTTTGGTACGGATTTGTTTCTATCGGCCAACCCGGTATCAGTACGGC GTGCGTTGGAGCATGGTATTGCTGCAGCAACGATCATGCCCCGCAGGCTGGGTGAACGTGTGGAGGCGGCGGCTGTTACC GACAACGTGTGTAGTTCCTTACCAGTGCAACTGCGCATTGCCTTTGATGGTGATGCAGTCATCTTTGGTGATGAGGGGGA GCGTATGTCTCGCGAGCAAGGCGTGGAGGCGTTTGGTCGCTATGAGCGTGAACGTGCACGTGAGCCGTTAACCGGTGGGC CGTTCCGTAATTTTTTATCTGCGCTCCAAGCATTACAGGCTGCATTCCCATCCGGTGAAGCTTCACCGATCCGTACGGCA TTAGTCACCGCGCGCTCAGCGCCGGCGCATGAGCGGGTCATCCGCACCCTGCGGGAGTGGGGCGTGCGTTTGGATGAGGC GCTGTTTTTGGGGGGACGGCATAAGGGGCCATTTCTGGAAGCTTTTGGGGCGGATATTTTCTTCGACGATTCGCAGCACA ATATTGACAGTGCCCACCAGCATCAAAGTGTGGCGGCAGGGCATGTTCCGCATGGCGTTGCCAACGATCCGGGATGA
Upstream 100 bases:
>100_bases CAGTTTGCTTTCTGAGCCATTTCTCGCCTCTCTGACCAGGATGCCAGTTCAGGAAGAAGGGAATGTTTGAGTTGTTCTTT CCACATCATGAACGTTGTAT
Downstream 100 bases:
>100_bases GCCGCTGTTAAGACTTGCTCTAGCTGCATGCTAGGGGTTTGGGATCATAAGACAGTGAAAGCTGTACGCGTTCTGTAAAG TGGGTGGGATGTATCTGTAT
Product: 5'-nucleotidase
Products: NA
Alternate protein names: 5-Nucleotidase 1A; 5-Nucleotidase Superfamily; 5 Nucleotidase; Uroporphyrin-III C-Methyltransferase-Like; 5-Nucleotidase Family Protein; 5-Nucleotidase Protein; 5-Nucleotidase Superfamily Protein
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPDHSHRLLTVAVTSRALFDLEEGHALFERDGVDAYAHYQRAHEDDVLQPGVAFPVVRKLLALNWGEGGDIPRVEVILLS RNSADTGLRIFNSIQHYGLGIVRATFTSGEATWPYVKPFGTDLFLSANPVSVRRALEHGIAAATIMPRRLGERVEAAAVT DNVCSSLPVQLRIAFDGDAVIFGDEGERMSREQGVEAFGRYERERAREPLTGGPFRNFLSALQALQAAFPSGEASPIRTA LVTARSAPAHERVIRTLREWGVRLDEALFLGGRHKGPFLEAFGADIFFDDSQHNIDSAHQHQSVAAGHVPHGVANDPG
Sequences:
>Translated_318_residues MPDHSHRLLTVAVTSRALFDLEEGHALFERDGVDAYAHYQRAHEDDVLQPGVAFPVVRKLLALNWGEGGDIPRVEVILLS RNSADTGLRIFNSIQHYGLGIVRATFTSGEATWPYVKPFGTDLFLSANPVSVRRALEHGIAAATIMPRRLGERVEAAAVT DNVCSSLPVQLRIAFDGDAVIFGDEGERMSREQGVEAFGRYERERAREPLTGGPFRNFLSALQALQAAFPSGEASPIRTA LVTARSAPAHERVIRTLREWGVRLDEALFLGGRHKGPFLEAFGADIFFDDSQHNIDSAHQHQSVAAGHVPHGVANDPG >Mature_317_residues PDHSHRLLTVAVTSRALFDLEEGHALFERDGVDAYAHYQRAHEDDVLQPGVAFPVVRKLLALNWGEGGDIPRVEVILLSR NSADTGLRIFNSIQHYGLGIVRATFTSGEATWPYVKPFGTDLFLSANPVSVRRALEHGIAAATIMPRRLGERVEAAAVTD NVCSSLPVQLRIAFDGDAVIFGDEGERMSREQGVEAFGRYERERAREPLTGGPFRNFLSALQALQAAFPSGEASPIRTAL VTARSAPAHERVIRTLREWGVRLDEALFLGGRHKGPFLEAFGADIFFDDSQHNIDSAHQHQSVAAGHVPHGVANDPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI14210538, Length=320, Percent_Identity=43.125, Blast_Score=233, Evalue=1e-61, Organism=Homo sapiens, GI50593110, Length=315, Percent_Identity=37.4603174603175, Blast_Score=206, Evalue=2e-53, Organism=Homo sapiens, GI50593108, Length=315, Percent_Identity=37.4603174603175, Blast_Score=206, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34784; Mature: 34653
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDHSHRLLTVAVTSRALFDLEEGHALFERDGVDAYAHYQRAHEDDVLQPGVAFPVVRKL CCCCCCEEEEEEEHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH LALNWGEGGDIPRVEVILLSRNSADTGLRIFNSIQHYGLGIVRATFTSGEATWPYVKPFG HHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEECCCC TDLFLSANPVSVRRALEHGIAAATIMPRRLGERVEAAAVTDNVCSSLPVQLRIAFDGDAV CEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEE IFGDEGERMSREQGVEAFGRYERERAREPLTGGPFRNFLSALQALQAAFPSGEASPIRTA EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH LVTARSAPAHERVIRTLREWGVRLDEALFLGGRHKGPFLEAFGADIFFDDSQHNIDSAHQ HHHHCCCCHHHHHHHHHHHHCCCHHHHHEECCCCCCCHHHHHCCCEEECCCCCCCCHHHH HQSVAAGHVPHGVANDPG HHHHHCCCCCCCCCCCCC >Mature Secondary Structure PDHSHRLLTVAVTSRALFDLEEGHALFERDGVDAYAHYQRAHEDDVLQPGVAFPVVRKL CCCCCEEEEEEEHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH LALNWGEGGDIPRVEVILLSRNSADTGLRIFNSIQHYGLGIVRATFTSGEATWPYVKPFG HHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEECCCC TDLFLSANPVSVRRALEHGIAAATIMPRRLGERVEAAAVTDNVCSSLPVQLRIAFDGDAV CEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEE IFGDEGERMSREQGVEAFGRYERERAREPLTGGPFRNFLSALQALQAAFPSGEASPIRTA EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH LVTARSAPAHERVIRTLREWGVRLDEALFLGGRHKGPFLEAFGADIFFDDSQHNIDSAHQ HHHHCCCCHHHHHHHHHHHHCCCHHHHHEECCCCCCCHHHHHCCCEEECCCCCCCCHHHH HQSVAAGHVPHGVANDPG HHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA