| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681365
Identifier: 182681365
GI number: 182681365
Start: 960366
End: 960878
Strand: Direct
Name: 182681365
Synonym: XfasM23_0812
Alternate gene names: NA
Gene position: 960366-960878 (Clockwise)
Preceding gene: 182681364
Following gene: 182681366
Centisome position: 37.87
GC content: 59.84
Gene sequence:
>513_bases ATGGCTGACACCCTGCAGTATCGCTTTGTGGTGCGTCGTGGGCGGGCGGCGACATGGAGGCTGCGTAATGAGCGTCTGCT CGGCGGTGAATTTGGTTTAGAAACCGACACGGGACAATTGAAGATCGGTGATGGCCTCACTGCCTGGAACGATCTGCCTT ACATGAAGGCGGGCACGCCGTTGGGGGCGGCTAATGCCGGTCACGGCGTGATGATTGATGTGAGCAACCCAGAGGTGCCG GTGTTCAGTGTCCCTGTGTACGAGGGCGGGGCAGGGATCGATATCAGCAACGGTGTGATTACCAACACACGCGCGGGCAT TGTGCTGGCCGGTGTGGTGGCCGATTACGCACATCTACCTCATCGGCTCACCGCAGGTGCGGCCTATTTGGTCAGCGATG ACGGGCTGATTTATGTGTACGACGGTAGCGCCTGGCCCGCTGAGGGGGACGGGATCGACCTCCGAGGCGGTGGGGGTGGC AACGATGATTACTTTTTTGGAGGGGGACTCTAA
Upstream 100 bases:
>100_bases GTGTACACACCGACGGATCCGCCGCCGCAGGACAGTACGATCAGTGCTGCCGAGGCCATGCCGGTGTTTGAGGGCGTCAT TGTGGATGGAGGTAACCTGG
Downstream 100 bases:
>100_bases CGCATGGCCAAATCCAGTAAACAATCCTTCGTGCAAAGCGTCGGTAACTTTGCAGCGCAGATCAGTCACGCGACCGGTGC AGGAGGCAAGGTCACGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MADTLQYRFVVRRGRAATWRLRNERLLGGEFGLETDTGQLKIGDGLTAWNDLPYMKAGTPLGAANAGHGVMIDVSNPEVP VFSVPVYEGGAGIDISNGVITNTRAGIVLAGVVADYAHLPHRLTAGAAYLVSDDGLIYVYDGSAWPAEGDGIDLRGGGGG NDDYFFGGGL
Sequences:
>Translated_170_residues MADTLQYRFVVRRGRAATWRLRNERLLGGEFGLETDTGQLKIGDGLTAWNDLPYMKAGTPLGAANAGHGVMIDVSNPEVP VFSVPVYEGGAGIDISNGVITNTRAGIVLAGVVADYAHLPHRLTAGAAYLVSDDGLIYVYDGSAWPAEGDGIDLRGGGGG NDDYFFGGGL >Mature_169_residues ADTLQYRFVVRRGRAATWRLRNERLLGGEFGLETDTGQLKIGDGLTAWNDLPYMKAGTPLGAANAGHGVMIDVSNPEVPV FSVPVYEGGAGIDISNGVITNTRAGIVLAGVVADYAHLPHRLTAGAAYLVSDDGLIYVYDGSAWPAEGDGIDLRGGGGGN DDYFFGGGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17802; Mature: 17671
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTLQYRFVVRRGRAATWRLRNERLLGGEFGLETDTGQLKIGDGLTAWNDLPYMKAGTP CCCCEEEEEEEECCCEEEEEECCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCEECCCC LGAANAGHGVMIDVSNPEVPVFSVPVYEGGAGIDISNGVITNTRAGIVLAGVVADYAHLP CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEECCCEEECCCCCEEEEEHHHHHHHCC HRLTAGAAYLVSDDGLIYVYDGSAWPAEGDGIDLRGGGGGNDDYFFGGGL CEECCCEEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCCCCEEECCCC >Mature Secondary Structure ADTLQYRFVVRRGRAATWRLRNERLLGGEFGLETDTGQLKIGDGLTAWNDLPYMKAGTP CCCEEEEEEEECCCEEEEEECCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCEECCCC LGAANAGHGVMIDVSNPEVPVFSVPVYEGGAGIDISNGVITNTRAGIVLAGVVADYAHLP CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEECCCEEECCCCCEEEEEHHHHHHHCC HRLTAGAAYLVSDDGLIYVYDGSAWPAEGDGIDLRGGGGGNDDYFFGGGL CEECCCEEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA