| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681296
Identifier: 182681296
GI number: 182681296
Start: 874733
End: 875347
Strand: Direct
Name: 182681296
Synonym: XfasM23_0742
Alternate gene names: NA
Gene position: 874733-875347 (Clockwise)
Preceding gene: 182681295
Following gene: 182681298
Centisome position: 34.5
GC content: 44.88
Gene sequence:
>615_bases ATGACGAGGATGAACGCAATTTTGTTAGGTTCTGTATTAAGAATCTTTATTATCACATTTATGATTCTCATCGCTGCTTG TCAAGTATCGTTACCAGATTCGGTGATGCCTCGTCCTGTGGATACTACGATGCATAAGCTTTCAGTGGCTGATCCGACTC AACCAGTGACTTCTGGAAATACACCGACGGCAGCGGACATCGCTGCTGTTGCGGCTCTGAATGCTGAGTTTGATCCGGGC CGTGATCCAGTCGCAGATTTGGCGACAGCGAAGGTTGAAGCGAAACGTGGTGGTAAGCAGATCATATTGAGTATTGGGAG CAAGAGGTGTTCCTGGTGCCGTGTTATGGATGAGTTTATTAATGGTGATGCTGAGATACGAAGTTTCCGTGACGCTCATT TTATTTGGATGAAGGTTAATGTTAGCGATGAAAATAAAAATGAGGTGTTTCTGGCGCGCTTCCCGAAAGTGAAGAATTAC CCTCACTTGTTCGTGCTTGATGCCGATGCCAAATTACTGAGTTCTCGGTTTACTGCTGATTTTGAGAAAGGTCACAGTTA TGATCGTAGGAGATTTTTTGCGTTCTTGCGCCAATCCGTGCCTTCAAAGAATTGA
Upstream 100 bases:
>100_bases TTTAAACGGAATCTCATCTTCACCTGCTCTAAAGAGTTGCTTTGGAACGGCCTGTTTTAAAATCTATTGGATCATGAATG ATGAGACGGATGTGATGTGG
Downstream 100 bases:
>100_bases GAGGCGCCCTCCATTTTTTTAGATTCTTTTACAAACGCATCCACCTGTGGTGGGATCTGAAAGATACAGCCAAATCCAGT CTTATCAAGAAATTATGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTRMNAILLGSVLRIFIITFMILIAACQVSLPDSVMPRPVDTTMHKLSVADPTQPVTSGNTPTAADIAAVAALNAEFDPG RDPVADLATAKVEAKRGGKQIILSIGSKRCSWCRVMDEFINGDAEIRSFRDAHFIWMKVNVSDENKNEVFLARFPKVKNY PHLFVLDADAKLLSSRFTADFEKGHSYDRRRFFAFLRQSVPSKN
Sequences:
>Translated_204_residues MTRMNAILLGSVLRIFIITFMILIAACQVSLPDSVMPRPVDTTMHKLSVADPTQPVTSGNTPTAADIAAVAALNAEFDPG RDPVADLATAKVEAKRGGKQIILSIGSKRCSWCRVMDEFINGDAEIRSFRDAHFIWMKVNVSDENKNEVFLARFPKVKNY PHLFVLDADAKLLSSRFTADFEKGHSYDRRRFFAFLRQSVPSKN >Mature_203_residues TRMNAILLGSVLRIFIITFMILIAACQVSLPDSVMPRPVDTTMHKLSVADPTQPVTSGNTPTAADIAAVAALNAEFDPGR DPVADLATAKVEAKRGGKQIILSIGSKRCSWCRVMDEFINGDAEIRSFRDAHFIWMKVNVSDENKNEVFLARFPKVKNYP HLFVLDADAKLLSSRFTADFEKGHSYDRRRFFAFLRQSVPSKN
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22765; Mature: 22633
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRMNAILLGSVLRIFIITFMILIAACQVSLPDSVMPRPVDTTMHKLSVADPTQPVTSGN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC TPTAADIAAVAALNAEFDPGRDPVADLATAKVEAKRGGKQIILSIGSKRCSWCRVMDEFI CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH NGDAEIRSFRDAHFIWMKVNVSDENKNEVFLARFPKVKNYPHLFVLDADAKLLSSRFTAD CCCHHHHHCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHH FEKGHSYDRRRFFAFLRQSVPSKN HHHCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TRMNAILLGSVLRIFIITFMILIAACQVSLPDSVMPRPVDTTMHKLSVADPTQPVTSGN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC TPTAADIAAVAALNAEFDPGRDPVADLATAKVEAKRGGKQIILSIGSKRCSWCRVMDEFI CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH NGDAEIRSFRDAHFIWMKVNVSDENKNEVFLARFPKVKNYPHLFVLDADAKLLSSRFTAD CCCHHHHHCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHH FEKGHSYDRRRFFAFLRQSVPSKN HHHCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA