| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294843
Identifier: 197294843
GI number: 197294843
Start: 867178
End: 867423
Strand: Reverse
Name: 197294843
Synonym: PAa_0830
Alternate gene names: NA
Gene position: 867423-867178 (Counterclockwise)
Preceding gene: 197294844
Following gene: 197294842
Centisome position: 98.58
GC content: 30.08
Gene sequence:
>246_bases TTGTGCAAATTTGAATTCAACCCCCAAACAGGAAAATTAACCAACCAAATAAATTACTTATCCGACGGCAAAACAATTAA GGAAACCATTAAATATGAATATAACTCTGAAACAGGAAAATTAACCAAACAAACCAAATTCAACAACAAAGATAAAAAAA CAGAAGAAATTAATTACAAATCCGACGGCAAAACCATTGATTACACCAAAAAATTCAATCCTGAAACTGGTCAAGAAATT CAATAG
Upstream 100 bases:
>100_bases TACTACGAAGACGGAAAACAAACCAAATACACCATTGAATTCAACTATCAAACAAAAAAACCGAACCCAAGAAATTCAGT ACAACCTTGATGGCTTAATT
Downstream 100 bases:
>100_bases ACCAAATTCAAATTTGATGCAAAACAAGCGTTTTCATCACAGAATTAGATCCAACCTCAGGAAAAGAAATCTAATAGATA AACTACCTTAACTTACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MCKFEFNPQTGKLTNQINYLSDGKTIKETIKYEYNSETGKLTKQTKFNNKDKKTEEINYKSDGKTIDYTKKFNPETGQEI Q
Sequences:
>Translated_81_residues MCKFEFNPQTGKLTNQINYLSDGKTIKETIKYEYNSETGKLTKQTKFNNKDKKTEEINYKSDGKTIDYTKKFNPETGQEI Q >Mature_81_residues MCKFEFNPQTGKLTNQINYLSDGKTIKETIKYEYNSETGKLTKQTKFNNKDKKTEEINYKSDGKTIDYTKKFNPETGQEI Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9498; Mature: 9498
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKFEFNPQTGKLTNQINYLSDGKTIKETIKYEYNSETGKLTKQTKFNNKDKKTEEINYK CCEECCCCCCCCCCCEEEECCCCCEEHHHEEECCCCCCCCEECCCCCCCCCCCCCCCCCC SDGKTIDYTKKFNPETGQEIQ CCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MCKFEFNPQTGKLTNQINYLSDGKTIKETIKYEYNSETGKLTKQTKFNNKDKKTEEINYK CCEECCCCCCCCCCCEEEECCCCCEEHHHEEECCCCCCCCEECCCCCCCCCCCCCCCCCC SDGKTIDYTKKFNPETGQEIQ CCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA