Click here to switch to the map view.

The map label for this gene is insK [H]

Identifier: 197294825

GI number: 197294825

Start: 830826

End: 831770

Strand: Direct

Name: insK [H]

Synonym: PAa_0811

Alternate gene names: 197294825

Gene position: 830826-831770 (Clockwise)

Preceding gene: 197294810

Following gene: 197294831

Centisome position: 94.42

GC content: 30.16

Gene sequence:

>945_bases
ATGCAAAAATTAAATAACAAAATAATATTATTACAAAATATGATTTCTCAAATTAAAACCATTGATAAAGAAATTGTTTT
TAAATTAGTTAAACGTTTTTTCAAAACTCTCAATTTATCTACCATCCTAAGAACAATCAAAATCAACCGCAGCACTTATT
ACTATTGGCTAAAAAATCAAGAAAAGAAACGATTACAACGCGAAAAATACCTTTTACAACAAAAACGTATCCAAGCTTTA
TGTTCTCGTTATCAATATTTTTACGGATATCGTAAAATAACTCATTTATATCAAAAAACTTTCAACGAACAAATCGCCAA
AGAAAAAGTGTATCAAATTATGAAAGAAAATAATATTTGCTGCCGTTTAAGAATAAAAAAAGTCAAACGTGCATATAAAA
ACAACTTAAAACCTAAATTAAGTATAGCACCCAACCTTATCAACCGCGATTTTATTGCAACCAAACCGCTTCAAAAATTA
TTTACCGACATCACATTTTTCCCAACTCCTGAAGGTTTTGTTTATTTTTCTGCCATCATTGATTCTTTTAACAATCAAAT
AATCGCCTACCACACCTCAAACCGCCAAGATAAAGAATTAATTTTAAATACAATCAAAAAATTACCCCCACTAAAAGACC
CTTGTGTTATTCATTCCGACCGCGGCACGGTTTACCAATCGCTCAAAGTACAAAATAAACTAATTAAAAAAGGCCTTTTA
ATCAGCATGTCCAGCAAAGCAACCCCACGCGATAACGCCGTGATTGAAAACTTTTTCGGCCAAATGAAAAGTATTTTATT
CAACCAACATCCGTTTTTATTTCAACAAGAAGCACACGAAATTAAAAAAATTATCAATCGCTTCCCTTCTTTTTGGAATA
AAAGATGGATGTTGGCTAAATTAAATAATTTATCGCCTTTAAAATATTCTCAATCCTTCAGATAA

Upstream 100 bases:

>100_bases
TCATTGAATAATTTTTGTCACAAATATGTTATAATATGTTACAATGGTTTTTGTAATTGGCAAAAACATATGGAGATAAT
CGATGTCAGAAACACAAAAA

Downstream 100 bases:

>100_bases
TATTTTAATTAATGATAAAATCAACTGCAACCTTTTTTAAAGAGAGGTTGCTTCACTGTACATTTTTTTGAGCAAAAATA
CCCTTGCAAAAACACAAAAC

Product: Putative phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MQKLNNKIILLQNMISQIKTIDKEIVFKLVKRFFKTLNLSTILRTIKINRSTYYYWLKNQEKKRLQREKYLLQQKRIQAL
CSRYQYFYGYRKITHLYQKTFNEQIAKEKVYQIMKENNICCRLRIKKVKRAYKNNLKPKLSIAPNLINRDFIATKPLQKL
FTDITFFPTPEGFVYFSAIIDSFNNQIIAYHTSNRQDKELILNTIKKLPPLKDPCVIHSDRGTVYQSLKVQNKLIKKGLL
ISMSSKATPRDNAVIENFFGQMKSILFNQHPFLFQQEAHEIKKIINRFPSFWNKRWMLAKLNNLSPLKYSQSFR

Sequences:

>Translated_314_residues
MQKLNNKIILLQNMISQIKTIDKEIVFKLVKRFFKTLNLSTILRTIKINRSTYYYWLKNQEKKRLQREKYLLQQKRIQAL
CSRYQYFYGYRKITHLYQKTFNEQIAKEKVYQIMKENNICCRLRIKKVKRAYKNNLKPKLSIAPNLINRDFIATKPLQKL
FTDITFFPTPEGFVYFSAIIDSFNNQIIAYHTSNRQDKELILNTIKKLPPLKDPCVIHSDRGTVYQSLKVQNKLIKKGLL
ISMSSKATPRDNAVIENFFGQMKSILFNQHPFLFQQEAHEIKKIINRFPSFWNKRWMLAKLNNLSPLKYSQSFR
>Mature_314_residues
MQKLNNKIILLQNMISQIKTIDKEIVFKLVKRFFKTLNLSTILRTIKINRSTYYYWLKNQEKKRLQREKYLLQQKRIQAL
CSRYQYFYGYRKITHLYQKTFNEQIAKEKVYQIMKENNICCRLRIKKVKRAYKNNLKPKLSIAPNLINRDFIATKPLQKL
FTDITFFPTPEGFVYFSAIIDSFNNQIIAYHTSNRQDKELILNTIKKLPPLKDPCVIHSDRGTVYQSLKVQNKLIKKGLL
ISMSSKATPRDNAVIENFFGQMKSILFNQHPFLFQQEAHEIKKIINRFPSFWNKRWMLAKLNNLSPLKYSQSFR

Specific function: Involved in the transposition of the insertion sequence IS150 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=238, Percent_Identity=29.4117647058824, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1789981, Length=275, Percent_Identity=34.9090909090909, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1788405, Length=251, Percent_Identity=25.4980079681275, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1787263, Length=251, Percent_Identity=25.4980079681275, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1786753, Length=251, Percent_Identity=25.4980079681275, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1786570, Length=251, Percent_Identity=25.4980079681275, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1786490, Length=251, Percent_Identity=25.4980079681275, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 37610; Mature: 37610

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLNNKIILLQNMISQIKTIDKEIVFKLVKRFFKTLNLSTILRTIKINRSTYYYWLKNQ
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCC
EKKRLQREKYLLQQKRIQALCSRYQYFYGYRKITHLYQKTFNEQIAKEKVYQIMKENNIC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
CRLRIKKVKRAYKNNLKPKLSIAPNLINRDFIATKPLQKLFTDITFFPTPEGFVYFSAII
EEHHHHHHHHHHHCCCCCEEECCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
DSFNNQIIAYHTSNRQDKELILNTIKKLPPLKDPCVIHSDRGTVYQSLKVQNKLIKKGLL
HHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCE
ISMSSKATPRDNAVIENFFGQMKSILFNQHPFLFQQEAHEIKKIINRFPSFWNKRWMLAK
EEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LNNLSPLKYSQSFR
CCCCCCCCCCCCCC
>Mature Secondary Structure
MQKLNNKIILLQNMISQIKTIDKEIVFKLVKRFFKTLNLSTILRTIKINRSTYYYWLKNQ
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCC
EKKRLQREKYLLQQKRIQALCSRYQYFYGYRKITHLYQKTFNEQIAKEKVYQIMKENNIC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
CRLRIKKVKRAYKNNLKPKLSIAPNLINRDFIATKPLQKLFTDITFFPTPEGFVYFSAII
EEHHHHHHHHHHHCCCCCEEECCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
DSFNNQIIAYHTSNRQDKELILNTIKKLPPLKDPCVIHSDRGTVYQSLKVQNKLIKKGLL
HHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCE
ISMSSKATPRDNAVIENFFGQMKSILFNQHPFLFQQEAHEIKKIINRFPSFWNKRWMLAK
EEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LNNLSPLKYSQSFR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2841644; 2541046; 8041620; 9278503 [H]