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The map label for this gene is whiA [H]

Identifier: 197294789

GI number: 197294789

Start: 791292

End: 792251

Strand: Direct

Name: whiA [H]

Synonym: PAa_0771

Alternate gene names: 197294789

Gene position: 791292-792251 (Clockwise)

Preceding gene: 197294788

Following gene: 197294790

Centisome position: 89.92

GC content: 22.92

Gene sequence:

>960_bases
ATGTCTTTTACTATCCAAATAAAAGAAGAAATTGCTTTACAAAAGTTATCACCTTTAGAAAATTTTTTTGAACTAACGGC
TTTATTGCATTTTGGCGCCGAATTAGAAAAAAACAATAAAAAGACTTTGTTATGGTTTAAAACCAAAAATCTTAAAATTG
CTAGAAGATTTCTGATTTTAATTAAATCATTTTATGATGTTAATTCTTTGTTAATGACTAGCAAAGAATATAATTTACCT
CATTTAAAAAGCATTTATATAGGAATCGAAAAAGAAATCCCTTTGATCTTAGGCCAACATCATTTTTTATTAAATAATCA
AAAAGACTTTTTCCAAGAATTAAAAAGAAGCCTTAAAAAGAAAAAAGCATATTTAAGAGGGGCTTTTTTGTGTATTGGTT
ATGTTTCTAATCCAGAAAAAAACAACAATCATTTAGAATTATTTCATCAAGATGCTTCCAAAATTAATTTAATTAAAGAA
TTAATGCTTGGATTCGGCCTTAATGCCAAACAAATTGCACATAAAAAAGGTTTTTTAGTATATTTGAAAGAATCGCAAAT
GATAATTGATTTTTTAAGGTTAATTGGTGCTTTTGAAACAGTTTTTCAATATGAAAAAAATAATATTCAAAAAGATTTTA
ATAAAATAATTAAAAAAACTATTAATTTTGAACTTTCTAATGAAAAAAAAATAATTAACAACGCAAACAAACAATTACAA
TCGATTAATTTGTTTGAAAAAAACCAAATTCAAGGGGATTTTTCGGATAAAAATAAAAAAATGTTCCAAATAATTGAACT
AAGAAAAAAATATCCTGATGCGAGTTTAAAAGAATTGACTCAAAAATATTGCAAAAAATATCAAAAAAAAATCACTAAAT
CAGGCATCAATTATTATTTTCAAAAAATTAAAGAGATAAATGAAAAAAGCGAAAGTTCTTTCAAAAAGAAAATTAAATAA

Upstream 100 bases:

>100_bases
TACAAAAGGCAAAAACACTAAACATCCAAATTATAGAAGAAAAAGAATTAGAAGAATTAATCCAAGAAAAATAAAAAGAT
AAAAAATTAAAGAGGGACTA

Downstream 100 bases:

>100_bases
AAAAAAAGTTAAAAAAATTAATTTTGGGTGATAAAAAATTGTTGTTCTTACTACTCTATAAACAACAAAAAACTTGTAAG
TTCAAAAGATATAAAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSFTIQIKEEIALQKLSPLENFFELTALLHFGAELEKNNKKTLLWFKTKNLKIARRFLILIKSFYDVNSLLMTSKEYNLP
HLKSIYIGIEKEIPLILGQHHFLLNNQKDFFQELKRSLKKKKAYLRGAFLCIGYVSNPEKNNNHLELFHQDASKINLIKE
LMLGFGLNAKQIAHKKGFLVYLKESQMIIDFLRLIGAFETVFQYEKNNIQKDFNKIIKKTINFELSNEKKIINNANKQLQ
SINLFEKNQIQGDFSDKNKKMFQIIELRKKYPDASLKELTQKYCKKYQKKITKSGINYYFQKIKEINEKSESSFKKKIK

Sequences:

>Translated_319_residues
MSFTIQIKEEIALQKLSPLENFFELTALLHFGAELEKNNKKTLLWFKTKNLKIARRFLILIKSFYDVNSLLMTSKEYNLP
HLKSIYIGIEKEIPLILGQHHFLLNNQKDFFQELKRSLKKKKAYLRGAFLCIGYVSNPEKNNNHLELFHQDASKINLIKE
LMLGFGLNAKQIAHKKGFLVYLKESQMIIDFLRLIGAFETVFQYEKNNIQKDFNKIIKKTINFELSNEKKIINNANKQLQ
SINLFEKNQIQGDFSDKNKKMFQIIELRKKYPDASLKELTQKYCKKYQKKITKSGINYYFQKIKEINEKSESSFKKKIK
>Mature_318_residues
SFTIQIKEEIALQKLSPLENFFELTALLHFGAELEKNNKKTLLWFKTKNLKIARRFLILIKSFYDVNSLLMTSKEYNLPH
LKSIYIGIEKEIPLILGQHHFLLNNQKDFFQELKRSLKKKKAYLRGAFLCIGYVSNPEKNNNHLELFHQDASKINLIKEL
MLGFGLNAKQIAHKKGFLVYLKESQMIIDFLRLIGAFETVFQYEKNNIQKDFNKIIKKTINFELSNEKKIINNANKQLQS
INLFEKNQIQGDFSDKNKKMFQIIELRKKYPDASLKELTQKYCKKYQKKITKSGINYYFQKIKEINEKSESSFKKKIK

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 37755; Mature: 37624

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTIQIKEEIALQKLSPLENFFELTALLHFGAELEKNNKKTLLWFKTKNLKIARRFLIL
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEEEEEEECCHHHHHHHHHH
IKSFYDVNSLLMTSKEYNLPHLKSIYIGIEKEIPLILGQHHFLLNNQKDFFQELKRSLKK
HHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCEEECCCHHEECCCHHHHHHHHHHHHH
KKAYLRGAFLCIGYVSNPEKNNNHLELFHQDASKINLIKELMLGFGLNAKQIAHKKGFLV
HHHHHHHHHEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEE
YLKESQMIIDFLRLIGAFETVFQYEKNNIQKDFNKIIKKTINFELSNEKKIINNANKQLQ
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
SINLFEKNQIQGDFSDKNKKMFQIIELRKKYPDASLKELTQKYCKKYQKKITKSGINYYF
HCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QKIKEINEKSESSFKKKIK
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFTIQIKEEIALQKLSPLENFFELTALLHFGAELEKNNKKTLLWFKTKNLKIARRFLIL
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEEEEEEECCHHHHHHHHHH
IKSFYDVNSLLMTSKEYNLPHLKSIYIGIEKEIPLILGQHHFLLNNQKDFFQELKRSLKK
HHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCEEECCCHHEECCCHHHHHHHHHHHHH
KKAYLRGAFLCIGYVSNPEKNNNHLELFHQDASKINLIKELMLGFGLNAKQIAHKKGFLV
HHHHHHHHHEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEE
YLKESQMIIDFLRLIGAFETVFQYEKNNIQKDFNKIIKKTINFELSNEKKIINNANKQLQ
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
SINLFEKNQIQGDFSDKNKKMFQIIELRKKYPDASLKELTQKYCKKYQKKITKSGINYYF
HCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QKIKEINEKSESSFKKKIK
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA