| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294730
Identifier: 197294730
GI number: 197294730
Start: 708286
End: 708846
Strand: Reverse
Name: 197294730
Synonym: PAa_0696
Alternate gene names: NA
Gene position: 708846-708286 (Counterclockwise)
Preceding gene: 197294731
Following gene: 197294729
Centisome position: 80.55
GC content: 25.85
Gene sequence:
>561_bases ATGAATTATCTCAAAAATAACTTGAAATTTTTTTTAAAGATTTTTTTAGGAACTTTTTTATATGCTTTTGCTATTTATTT TTTTATTTTTACTAGTTTTATTAAAAACGGTGGTGAAAACGGCTTTATTTTTTCTGGTGGTACCGAAGGAATAACTGTTT TTTTAGGCCAAATTATACCTTTTTTGGATAACAACCCAAACTTAAAATTAATTCTTATTTTAAGTGTTTTTCTTTTTCTT TGTCTTTTAATAGCTGCCTTTTTCTTAGATTTTAATACAATTAAAAAATCTTTGGGAACAACATTATTATTAATTTTATT TTTACTTGTTTTCAATTATTTTTTTCAAGGAGAAACACAAAGAAAAGTTTTTAGTGTTTTTTTGCAACGACGAGAAGCAG GAGAAAAGGGATTTCATTTGACAAGCTGTGGGCTTGGACATTTACTTTATGTTATACCTTTCTCCATGGGTTTTGTTTTT TTTGTTTTTGGTCTGTATTTTTTAATGCCATCGGAAAATGTTTTTTTTAGGTTTAGATCTTTTTGGGCAAATATTGGTTA A
Upstream 100 bases:
>100_bases ATCGCAATATTTCTAATACTACCCAATTTGGGGTTAATGTTATTAGAGACAAAATAACAATGAAATCCAATTATACCAAG GAAAACGAAAATAAAAAATC
Downstream 100 bases:
>100_bases AAGAATGAAAAATAAAACTAAAGCTCCAATTATATATTTATTTTCACTTTGGACCCTAGATTTTATTCTTTTGATTTTAT CTTTTAGTTTTTATTCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MNYLKNNLKFFLKIFLGTFLYAFAIYFFIFTSFIKNGGENGFIFSGGTEGITVFLGQIIPFLDNNPNLKLILILSVFLFL CLLIAAFFLDFNTIKKSLGTTLLLILFLLVFNYFFQGETQRKVFSVFLQRREAGEKGFHLTSCGLGHLLYVIPFSMGFVF FVFGLYFLMPSENVFFRFRSFWANIG
Sequences:
>Translated_186_residues MNYLKNNLKFFLKIFLGTFLYAFAIYFFIFTSFIKNGGENGFIFSGGTEGITVFLGQIIPFLDNNPNLKLILILSVFLFL CLLIAAFFLDFNTIKKSLGTTLLLILFLLVFNYFFQGETQRKVFSVFLQRREAGEKGFHLTSCGLGHLLYVIPFSMGFVF FVFGLYFLMPSENVFFRFRSFWANIG >Mature_186_residues MNYLKNNLKFFLKIFLGTFLYAFAIYFFIFTSFIKNGGENGFIFSGGTEGITVFLGQIIPFLDNNPNLKLILILSVFLFL CLLIAAFFLDFNTIKKSLGTTLLLILFLLVFNYFFQGETQRKVFSVFLQRREAGEKGFHLTSCGLGHLLYVIPFSMGFVF FVFGLYFLMPSENVFFRFRSFWANIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21493; Mature: 21493
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLKNNLKFFLKIFLGTFLYAFAIYFFIFTSFIKNGGENGFIFSGGTEGITVFLGQIIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHH FLDNNPNLKLILILSVFLFLCLLIAAFFLDFNTIKKSLGTTLLLILFLLVFNYFFQGETQ HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RKVFSVFLQRREAGEKGFHLTSCGLGHLLYVIPFSMGFVFFVFGLYFLMPSENVFFRFRS HHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FWANIG HHHCCC >Mature Secondary Structure MNYLKNNLKFFLKIFLGTFLYAFAIYFFIFTSFIKNGGENGFIFSGGTEGITVFLGQIIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHH FLDNNPNLKLILILSVFLFLCLLIAAFFLDFNTIKKSLGTTLLLILFLLVFNYFFQGETQ HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RKVFSVFLQRREAGEKGFHLTSCGLGHLLYVIPFSMGFVFFVFGLYFLMPSENVFFRFRS HHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FWANIG HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA