| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294716
Identifier: 197294716
GI number: 197294716
Start: 690551
End: 690778
Strand: Reverse
Name: 197294716
Synonym: PAa_0682
Alternate gene names: NA
Gene position: 690778-690551 (Counterclockwise)
Preceding gene: 197294717
Following gene: 197294715
Centisome position: 78.5
GC content: 29.82
Gene sequence:
>228_bases GTGGCAAAAACTTTTCCAAAAACTTATTTAATCGGGGAAAGAGCGAGAGTTGAAAACGAAAAAGAAATAGCAGTTATTAC CCGCATTGACTTTGAAAGAGGATTTATTTATTTATTATTTAAAAGAATGAGAGAAGAAAAATATCCTTTTCCTCAAGCTT TAGAACAAAATATTGTGAAACCGATAATATCGAAACAACACCGCAAACCTTTAGTTTTTAATAGTTAA
Upstream 100 bases:
>100_bases TAAAAAAAACAAACTAAAAAAAGTTTGTTTTTTTTATTATTTTATTTTTTTTTGAACGTTTTATAAGTAAATTTTCATTT TTTAAGAAGGTAGGTTATCT
Downstream 100 bases:
>100_bases TTTTTTAGTTTTTGTGATTACAAAGAGGAAACGATATGTTTATTAAAAATAAAATAAAAAAAATAGCTTTTCGTAATTAT TTTAAAAACCCTGATATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MAKTFPKTYLIGERARVENEKEIAVITRIDFERGFIYLLFKRMREEKYPFPQALEQNIVKPIISKQHRKPLVFNS
Sequences:
>Translated_75_residues MAKTFPKTYLIGERARVENEKEIAVITRIDFERGFIYLLFKRMREEKYPFPQALEQNIVKPIISKQHRKPLVFNS >Mature_74_residues AKTFPKTYLIGERARVENEKEIAVITRIDFERGFIYLLFKRMREEKYPFPQALEQNIVKPIISKQHRKPLVFNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9013; Mature: 8882
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTFPKTYLIGERARVENEKEIAVITRIDFERGFIYLLFKRMREEKYPFPQALEQNIVK CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH PIISKQHRKPLVFNS HHHHHHCCCCCCCCC >Mature Secondary Structure AKTFPKTYLIGERARVENEKEIAVITRIDFERGFIYLLFKRMREEKYPFPQALEQNIVK CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH PIISKQHRKPLVFNS HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA