| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294656
Identifier: 197294656
GI number: 197294656
Start: 607835
End: 608278
Strand: Reverse
Name: 197294656
Synonym: PAa_0612
Alternate gene names: NA
Gene position: 608278-607835 (Counterclockwise)
Preceding gene: 197294657
Following gene: 197294655
Centisome position: 69.13
GC content: 27.93
Gene sequence:
>444_bases ATGAAACGCATTAACTTTATCGCTTCTTTAACTAAAAATTATAATACCGTCTTAGATATAGGAACTGACCATGGATTTGT TTTAAAAAAAGCTTTTCACGAAGGTTATATCAAAAAAGCAATTGCTTCTGATTTAAGGATAAAACCTTTATTACAATCTC AAAAAACACTTCAAAATTATCCTGTTACTTTTTGTTTGAGCGACGGTTTTCAAAAGATTAATCAAGATTTTGATTTAGCT TTGATTTGTGGAATGGGGACTTATACTATTATCAAAATAATGGAACAAGCCCCTGATAAAAGCAAACATTTTTTATTAGG AACCCAAAGCAAATATCAGCTTTTAAAGCAATGGCTAGAACAAAATAATTATCTTATTTTAGAAGAACATCATTTATTTG ATAAATTTCTATATTCCTTTTTAAAGGTAACCGGAAAAAGGTAA
Upstream 100 bases:
>100_bases AGAAAGAATTCGCCAAATTGAATCCAAAGCCTTAAGACGTTTAAGAACCCCAGCTAAACAAAGTAAATTAAAAAGTTTAT ATCAAAACTAAAAAGAAAAA
Downstream 100 bases:
>100_bases ACTGTTGTGTTTTTTTGAGATACCTTTTGTTTTTAAATCATCCTTAAGGTTTAATTTTATAGACCTTCAAATTAAAAAAT AATTTTAACTGATCAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKRINFIASLTKNYNTVLDIGTDHGFVLKKAFHEGYIKKAIASDLRIKPLLQSQKTLQNYPVTFCLSDGFQKINQDFDLA LICGMGTYTIIKIMEQAPDKSKHFLLGTQSKYQLLKQWLEQNNYLILEEHHLFDKFLYSFLKVTGKR
Sequences:
>Translated_147_residues MKRINFIASLTKNYNTVLDIGTDHGFVLKKAFHEGYIKKAIASDLRIKPLLQSQKTLQNYPVTFCLSDGFQKINQDFDLA LICGMGTYTIIKIMEQAPDKSKHFLLGTQSKYQLLKQWLEQNNYLILEEHHLFDKFLYSFLKVTGKR >Mature_147_residues MKRINFIASLTKNYNTVLDIGTDHGFVLKKAFHEGYIKKAIASDLRIKPLLQSQKTLQNYPVTFCLSDGFQKINQDFDLA LICGMGTYTIIKIMEQAPDKSKHFLLGTQSKYQLLKQWLEQNNYLILEEHHLFDKFLYSFLKVTGKR
Specific function: Unknown
COG id: COG2384
COG function: function code R; Predicted SAM-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17109; Mature: 17109
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRINFIASLTKNYNTVLDIGTDHGFVLKKAFHEGYIKKAIASDLRIKPLLQSQKTLQNY CCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC PVTFCLSDGFQKINQDFDLALICGMGTYTIIKIMEQAPDKSKHFLLGTQSKYQLLKQWLE CEEEEEHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH QNNYLILEEHHLFDKFLYSFLKVTGKR CCCEEEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRINFIASLTKNYNTVLDIGTDHGFVLKKAFHEGYIKKAIASDLRIKPLLQSQKTLQNY CCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC PVTFCLSDGFQKINQDFDLALICGMGTYTIIKIMEQAPDKSKHFLLGTQSKYQLLKQWLE CEEEEEHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHH QNNYLILEEHHLFDKFLYSFLKVTGKR CCCEEEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA