The gene/protein map for NC_010544 is currently unavailable.
Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

Click here to switch to the map view.

The map label for this gene is 197294644

Identifier: 197294644

GI number: 197294644

Start: 592566

End: 593408

Strand: Reverse

Name: 197294644

Synonym: PAa_0600

Alternate gene names: NA

Gene position: 593408-592566 (Counterclockwise)

Preceding gene: 197294655

Following gene: 197294643

Centisome position: 67.44

GC content: 28.59

Gene sequence:

>843_bases
GTGAAATTTATGAGTAATAATTTTTTTAAAAAATATTTAGCAGTTATTGTTGTCATTTTTCTTTTTGGGATTGTAATTAT
CATCAGTATTTATCAAAGATTTAATTCCTTTCAAAACCTCAAAAAACCTTTACCTTCTTTAGAATCGCCTTCAAACCCAA
AATCAATTGCATTTAAAGATAAAAAAACAACTCCAAAACCATCATCCCTTGAAAAACAAAAACTAATTGAACCTAAAATT
AAAACAACTGCTGCTAGATTAGAAAAAATTAAAACTTATCTTTGTGCTAATTTACCCTCCTCTTCTTTATTACCTTCTGA
TTTATCCGAAAGAGAACGAACAGAAATTGATTGCATTCAAAACAGTTTGGTCTCATTTTCAAAAACTGCTGAAGAAAGAA
GAAATAAAATTAATGAACACCGAAATACATTCAATGAAATTCGTGCCCAAATTAATTCTGTTAAATCTCAAATAGAATAC
AAATACCACCAAAAACAACAATTAAAGGAACGCATAAAAATCAACTCCCAAGAAAAAAATTCCAAAGAAGAAGCCCTCCA
AAAAGCAAATATTGCTGAAAGAAAAAAAATACAAAATGAAATTGATAAACTTGCAGAAGAAAGAACCCAACTAGATGGCG
AATTCGAAGGTATTGAAAATCAACTTAAAAACCTTAAAGCAGACCGAAAAAAGTATCAAGAAAGATTAAATAGTTCCTCC
CAACAACAAGCAATTTTTGAAAAACGATCTGCATTTTTAGAAGCAAACGAAAAATCTGCAAAAGAAGATATTATATCAAA
ATCTCTTAACTCCATTTACGAAATTATTCCAACTGAGGAATAA

Upstream 100 bases:

>100_bases
TGACTTAAAGCCCTTAAACTTATAAGGGCTTTTTTTGACTAAAAAACTGATTTTAATACTTTTTTGCTTGACAACAAAAC
TAAAGATTGTTATAATATAA

Downstream 100 bases:

>100_bases
AAAATAATCCATCAAAAATCTGTTTTATTTTCTTAATTTTTCCTCTAAATAATAAAAAATCTAAACTAGTGAACGAGTTG
TTTGAAAAAAATACCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKFMSNNFFKKYLAVIVVIFLFGIVIIISIYQRFNSFQNLKKPLPSLESPSNPKSIAFKDKKTTPKPSSLEKQKLIEPKI
KTTAARLEKIKTYLCANLPSSSLLPSDLSERERTEIDCIQNSLVSFSKTAEERRNKINEHRNTFNEIRAQINSVKSQIEY
KYHQKQQLKERIKINSQEKNSKEEALQKANIAERKKIQNEIDKLAEERTQLDGEFEGIENQLKNLKADRKKYQERLNSSS
QQQAIFEKRSAFLEANEKSAKEDIISKSLNSIYEIIPTEE

Sequences:

>Translated_280_residues
MKFMSNNFFKKYLAVIVVIFLFGIVIIISIYQRFNSFQNLKKPLPSLESPSNPKSIAFKDKKTTPKPSSLEKQKLIEPKI
KTTAARLEKIKTYLCANLPSSSLLPSDLSERERTEIDCIQNSLVSFSKTAEERRNKINEHRNTFNEIRAQINSVKSQIEY
KYHQKQQLKERIKINSQEKNSKEEALQKANIAERKKIQNEIDKLAEERTQLDGEFEGIENQLKNLKADRKKYQERLNSSS
QQQAIFEKRSAFLEANEKSAKEDIISKSLNSIYEIIPTEE
>Mature_280_residues
MKFMSNNFFKKYLAVIVVIFLFGIVIIISIYQRFNSFQNLKKPLPSLESPSNPKSIAFKDKKTTPKPSSLEKQKLIEPKI
KTTAARLEKIKTYLCANLPSSSLLPSDLSERERTEIDCIQNSLVSFSKTAEERRNKINEHRNTFNEIRAQINSVKSQIEY
KYHQKQQLKERIKINSQEKNSKEEALQKANIAERKKIQNEIDKLAEERTQLDGEFEGIENQLKNLKADRKKYQERLNSSS
QQQAIFEKRSAFLEANEKSAKEDIISKSLNSIYEIIPTEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32552; Mature: 32552

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFMSNNFFKKYLAVIVVIFLFGIVIIISIYQRFNSFQNLKKPLPSLESPSNPKSIAFKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
KKTTPKPSSLEKQKLIEPKIKTTAARLEKIKTYLCANLPSSSLLPSDLSERERTEIDCIQ
CCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
NSLVSFSKTAEERRNKINEHRNTFNEIRAQINSVKSQIEYKYHQKQQLKERIKINSQEKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SKEEALQKANIAERKKIQNEIDKLAEERTQLDGEFEGIENQLKNLKADRKKYQERLNSSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
QQQAIFEKRSAFLEANEKSAKEDIISKSLNSIYEIIPTEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKFMSNNFFKKYLAVIVVIFLFGIVIIISIYQRFNSFQNLKKPLPSLESPSNPKSIAFKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
KKTTPKPSSLEKQKLIEPKIKTTAARLEKIKTYLCANLPSSSLLPSDLSERERTEIDCIQ
CCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
NSLVSFSKTAEERRNKINEHRNTFNEIRAQINSVKSQIEYKYHQKQQLKERIKINSQEKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SKEEALQKANIAERKKIQNEIDKLAEERTQLDGEFEGIENQLKNLKADRKKYQERLNSSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
QQQAIFEKRSAFLEANEKSAKEDIISKSLNSIYEIIPTEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA