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The map label for this gene is rpmD [H]

Identifier: 197294613

GI number: 197294613

Start: 575627

End: 575824

Strand: Reverse

Name: rpmD [H]

Synonym: PAa_0569

Alternate gene names: 197294613

Gene position: 575824-575627 (Counterclockwise)

Preceding gene: 197294614

Following gene: 197294612

Centisome position: 65.44

GC content: 30.81

Gene sequence:

>198_bases
ATGAAACTTAAAATTACTTTAATCAAAAGCTTAATTTCTTGTCGCCAAAACCAAATAAGAACCGCTTATTCTTTAGGTTT
AAAAAAAATAAACAATCAAGTTATCAAAGATGATGTTCCAGCCATCCATGGAATGATCAAAACGATTAGTCATCTTGTTG
TGGTTCAAAAAGTTTGTGACACAAAGGAGGAAGCATAA

Upstream 100 bases:

>100_bases
CTATTAATGTTATTAGAGCTGTGATGGATGGATTAAAAAATTTAAGAACAAAAGAAGAAGTAGCTAAATTAAGAGGTCTT
ACTTTAGCCAAAAATGAACA

Downstream 100 bases:

>100_bases
TGCTACACACTATCAAACCCGTTGCCAATGCTCGTAAAACGACCAAACGTTTAGGTCGTGGTCCTGGTAGTGGCACTGGA
AAAACTTCCGGAAAAGGCCA

Product: 50S ribosomal protein L30

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MKLKITLIKSLISCRQNQIRTAYSLGLKKINNQVIKDDVPAIHGMIKTISHLVVVQKVCDTKEEA

Sequences:

>Translated_65_residues
MKLKITLIKSLISCRQNQIRTAYSLGLKKINNQVIKDDVPAIHGMIKTISHLVVVQKVCDTKEEA
>Mature_65_residues
MKLKITLIKSLISCRQNQIRTAYSLGLKKINNQVIKDDVPAIHGMIKTISHLVVVQKVCDTKEEA

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005996
- InterPro:   IPR016082 [H]

Pfam domain/function: PF00327 Ribosomal_L30 [H]

EC number: NA

Molecular weight: Translated: 7318; Mature: 7318

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKITLIKSLISCRQNQIRTAYSLGLKKINNQVIKDDVPAIHGMIKTISHLVVVQKVCD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TKEEA
CCCCC
>Mature Secondary Structure
MKLKITLIKSLISCRQNQIRTAYSLGLKKINNQVIKDDVPAIHGMIKTISHLVVVQKVCD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TKEEA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA