The gene/protein map for NC_010544 is currently unavailable.
Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is dnaJ [H]

Identifier: 197294598

GI number: 197294598

Start: 564063

End: 565106

Strand: Reverse

Name: dnaJ [H]

Synonym: PAa_0554

Alternate gene names: 197294598

Gene position: 565106-564063 (Counterclockwise)

Preceding gene: 197294599

Following gene: 197294596

Centisome position: 64.22

GC content: 32.28

Gene sequence:

>1044_bases
ATGACAAAAAAAGATTATTATCAAGTTTTAGGATTGAATAAAGAAGCAACCCCTAAAGAAATTAAAAAAGCTTATCTTAG
ACTTGCTAAAAAATATCACCCCGATGTTTCTCAAGAAGCTAATGCTGAAGCCAATTTTAAAGAAATTCAAGAAGCTTATA
GTGTTTTAAGCGATGCTAATAAAAAAGCTAATTATGATCGTTTTGGCCACGATTCCCAAACGCAACAACAAGGATTTTCT
GGTTTTGAAGGTTTTGAAGAAAATATTTTTAATTCTTTCAGTGATTTTTTTGGCACCAACAAACGCAGTCGAAAAGTTAA
CTATGATAAAAAAGTAGAAATGACAATTAGCTTTATGGATGCAGTTTTAGGAGCTTTGAAAAACATCGATATTATGGTTG
ATGCTGATTGCCAAGTTTGTCAAGGAAAAGGAGCTTTATCCTCAAGCGATATTGTTAAATGTAGACATTGTAATGGTTTA
GGACAAGTAATTACCGAACAAAGAACTTTTTTAGGCAATATCCGTTCTCAACAAACTTGTCCTTATTGTCGCGGAGAAGG
CGAACAAATTAAAAACAAATGTTATTCTTGTCATGGCTCAAAACGTCAGAAAAAGAAACAATCAGTTAGTTTTCAAATTC
CTGCAGGGATTGAGGAAGGAATGTCTTTTCAAATTCATGGAAAAGGCAATTTCCCTCCTTTAAGCAACCAAGCAGGCGAT
TTATACATTAACTTTAAAATTCGTCCTCATGAATCATTTGTGAGAAAAAACCAAGATATTGTTTTAGAAATCTTTATTAA
TGTCCCTGAAGCCGTTTTGGGAACTAATAAGCTTATTCCTACTATTTACGGCGAAGTTAATTTAAAAATACCATCAGGAA
TTCAATCAGGAAATAAACTGCGCATGAAAAACCAAGGAATAGCTTATCTCAATTCTTCCTATCGTAAAGGTGATCAATAT
GTAGTTGTTCATGTAAAAATACCAAGTTCACCTACTTTAGAAGAAAAAAGACTTTATCTCAAATTACTACAATTAAGTAA
CTAA

Upstream 100 bases:

>100_bases
TAGTAGATGCAGATTTTGAAGAAAAAAAATAAACTATCAAAACAATCAAACGAAGGATAAAACAAACCTTTATTGAATTG
TTGGGCGGAGCGACAATAAT

Downstream 100 bases:

>100_bases
AAAAATTTCCAGATTTTGATTAATCCCAATTGTTTTCTAACAGCTGGGATTTTTTTTATTTATCTTAATGAATTTTTACA
AATCCAATACACAGAAATAA

Product: Chaperone protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTKKDYYQVLGLNKEATPKEIKKAYLRLAKKYHPDVSQEANAEANFKEIQEAYSVLSDANKKANYDRFGHDSQTQQQGFS
GFEGFEENIFNSFSDFFGTNKRSRKVNYDKKVEMTISFMDAVLGALKNIDIMVDADCQVCQGKGALSSSDIVKCRHCNGL
GQVITEQRTFLGNIRSQQTCPYCRGEGEQIKNKCYSCHGSKRQKKKQSVSFQIPAGIEEGMSFQIHGKGNFPPLSNQAGD
LYINFKIRPHESFVRKNQDIVLEIFINVPEAVLGTNKLIPTIYGEVNLKIPSGIQSGNKLRMKNQGIAYLNSSYRKGDQY
VVVHVKIPSSPTLEEKRLYLKLLQLSN

Sequences:

>Translated_347_residues
MTKKDYYQVLGLNKEATPKEIKKAYLRLAKKYHPDVSQEANAEANFKEIQEAYSVLSDANKKANYDRFGHDSQTQQQGFS
GFEGFEENIFNSFSDFFGTNKRSRKVNYDKKVEMTISFMDAVLGALKNIDIMVDADCQVCQGKGALSSSDIVKCRHCNGL
GQVITEQRTFLGNIRSQQTCPYCRGEGEQIKNKCYSCHGSKRQKKKQSVSFQIPAGIEEGMSFQIHGKGNFPPLSNQAGD
LYINFKIRPHESFVRKNQDIVLEIFINVPEAVLGTNKLIPTIYGEVNLKIPSGIQSGNKLRMKNQGIAYLNSSYRKGDQY
VVVHVKIPSSPTLEEKRLYLKLLQLSN
>Mature_346_residues
TKKDYYQVLGLNKEATPKEIKKAYLRLAKKYHPDVSQEANAEANFKEIQEAYSVLSDANKKANYDRFGHDSQTQQQGFSG
FEGFEENIFNSFSDFFGTNKRSRKVNYDKKVEMTISFMDAVLGALKNIDIMVDADCQVCQGKGALSSSDIVKCRHCNGLG
QVITEQRTFLGNIRSQQTCPYCRGEGEQIKNKCYSCHGSKRQKKKQSVSFQIPAGIEEGMSFQIHGKGNFPPLSNQAGDL
YINFKIRPHESFVRKNQDIVLEIFINVPEAVLGTNKLIPTIYGEVNLKIPSGIQSGNKLRMKNQGIAYLNSSYRKGDQYV
VVHVKIPSSPTLEEKRLYLKLLQLSN

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360838, Length=351, Percent_Identity=31.9088319088319, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI205360840, Length=351, Percent_Identity=31.9088319088319, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI194328760, Length=341, Percent_Identity=29.9120234604106, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI194328758, Length=341, Percent_Identity=29.9120234604106, Blast_Score=146, Evalue=3e-35,
Organism=Homo sapiens, GI4504511, Length=348, Percent_Identity=30.4597701149425, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI5031741, Length=349, Percent_Identity=28.3667621776504, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI194328762, Length=310, Percent_Identity=27.4193548387097, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI56549115, Length=361, Percent_Identity=27.1468144044321, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI201862518, Length=361, Percent_Identity=27.1468144044321, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI201862587, Length=361, Percent_Identity=26.8698060941828, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI6631085, Length=356, Percent_Identity=26.4044943820225, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI5453690, Length=346, Percent_Identity=26.0115606936416, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI7706495, Length=348, Percent_Identity=25.5747126436782, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI9558755, Length=110, Percent_Identity=42.7272727272727, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI194306642, Length=101, Percent_Identity=43.5643564356436, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI194306640, Length=101, Percent_Identity=43.5643564356436, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI39204547, Length=159, Percent_Identity=33.9622641509434, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=53.030303030303, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=53.030303030303, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI21553335, Length=67, Percent_Identity=52.2388059701493, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI23503241, Length=78, Percent_Identity=47.4358974358974, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI47777312, Length=105, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI72534740, Length=101, Percent_Identity=41.5841584158416, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI56687498, Length=119, Percent_Identity=33.6134453781513, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI22749377, Length=101, Percent_Identity=35.6435643564356, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI27151736, Length=108, Percent_Identity=38.8888888888889, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI88501736, Length=108, Percent_Identity=38.8888888888889, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI45504382, Length=65, Percent_Identity=52.3076923076923, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI1786197, Length=349, Percent_Identity=36.9627507163324, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1787235, Length=347, Percent_Identity=29.6829971181556, Blast_Score=123, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17553098, Length=355, Percent_Identity=34.9295774647887, Blast_Score=194, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17553096, Length=355, Percent_Identity=34.9295774647887, Blast_Score=194, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI17507263, Length=334, Percent_Identity=30.2395209580838, Blast_Score=121, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17534355, Length=109, Percent_Identity=50.4587155963303, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17563890, Length=368, Percent_Identity=23.6413043478261, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI115532476, Length=86, Percent_Identity=45.3488372093023, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17554644, Length=100, Percent_Identity=43, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17538236, Length=125, Percent_Identity=36.8, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321094, Length=397, Percent_Identity=29.7229219143577, Blast_Score=135, Evalue=7e-33,
Organism=Saccharomyces cerevisiae, GI6323870, Length=346, Percent_Identity=30.0578034682081, Blast_Score=125, Evalue=9e-30,
Organism=Saccharomyces cerevisiae, GI6324265, Length=290, Percent_Identity=31.7241379310345, Blast_Score=124, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6323119, Length=385, Percent_Identity=26.4935064935065, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6320888, Length=97, Percent_Identity=43.298969072165, Blast_Score=79, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6323813, Length=104, Percent_Identity=39.4230769230769, Blast_Score=69, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6322388, Length=70, Percent_Identity=45.7142857142857, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45552813, Length=379, Percent_Identity=29.8153034300792, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI45552811, Length=377, Percent_Identity=30.5039787798408, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI45549272, Length=379, Percent_Identity=29.8153034300792, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI28574949, Length=351, Percent_Identity=29.3447293447293, Blast_Score=145, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24646562, Length=284, Percent_Identity=31.6901408450704, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24646560, Length=284, Percent_Identity=31.6901408450704, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24646558, Length=284, Percent_Identity=31.6901408450704, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24646556, Length=284, Percent_Identity=31.6901408450704, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI21357547, Length=284, Percent_Identity=31.6901408450704, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI20129487, Length=344, Percent_Identity=29.6511627906977, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24584014, Length=344, Percent_Identity=29.6511627906977, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI85726398, Length=375, Percent_Identity=27.2, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI19920464, Length=347, Percent_Identity=23.6311239193084, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24658562, Length=68, Percent_Identity=54.4117647058823, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24658555, Length=68, Percent_Identity=54.4117647058823, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI18858081, Length=358, Percent_Identity=24.3016759776536, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI17648033, Length=114, Percent_Identity=38.5964912280702, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24584630, Length=114, Percent_Identity=38.5964912280702, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24654066, Length=69, Percent_Identity=49.2753623188406, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24654070, Length=69, Percent_Identity=49.2753623188406, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24654068, Length=69, Percent_Identity=49.2753623188406, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24654072, Length=69, Percent_Identity=49.2753623188406, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=51.5625, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24641698, Length=64, Percent_Identity=45.3125, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24641696, Length=64, Percent_Identity=45.3125, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21358273, Length=68, Percent_Identity=51.4705882352941, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24668492, Length=68, Percent_Identity=41.1764705882353, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 39199; Mature: 39068

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTKKDYYQVLGLNKEATPKEIKKAYLRLAKKYHPDVSQEANAEANFKEIQEAYSVLSDAN
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
KKANYDRFGHDSQTQQQGFSGFEGFEENIFNSFSDFFGTNKRSRKVNYDKKVEMTISFMD
CCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH
AVLGALKNIDIMVDADCQVCQGKGALSSSDIVKCRHCNGLGQVITEQRTFLGNIRSQQTC
HHHHHHHCCEEEECCCCCEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCC
PYCRGEGEQIKNKCYSCHGSKRQKKKQSVSFQIPAGIEEGMSFQIHGKGNFPPLSNQAGD
CCCCCCCHHHHHHHHHCCCHHHHHHHHCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCC
LYINFKIRPHESFVRKNQDIVLEIFINVPEAVLGTNKLIPTIYGEVNLKIPSGIQSGNKL
EEEEEEECCCHHHHHCCCCEEEEEEECCCHHHHCCCCCCEEEECEEEEEECCCCCCCCEE
RMKNQGIAYLNSSYRKGDQYVVVHVKIPSSPTLEEKRLYLKLLQLSN
EECCCCEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKKDYYQVLGLNKEATPKEIKKAYLRLAKKYHPDVSQEANAEANFKEIQEAYSVLSDAN
CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
KKANYDRFGHDSQTQQQGFSGFEGFEENIFNSFSDFFGTNKRSRKVNYDKKVEMTISFMD
CCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH
AVLGALKNIDIMVDADCQVCQGKGALSSSDIVKCRHCNGLGQVITEQRTFLGNIRSQQTC
HHHHHHHCCEEEECCCCCEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCC
PYCRGEGEQIKNKCYSCHGSKRQKKKQSVSFQIPAGIEEGMSFQIHGKGNFPPLSNQAGD
CCCCCCCHHHHHHHHHCCCHHHHHHHHCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCC
LYINFKIRPHESFVRKNQDIVLEIFINVPEAVLGTNKLIPTIYGEVNLKIPSGIQSGNKL
EEEEEEECCCHHHHHCCCCEEEEEEECCCHHHHCCCCCCEEEECEEEEEECCCCCCCCEE
RMKNQGIAYLNSSYRKGDQYVVVHVKIPSSPTLEEKRLYLKLLQLSN
EECCCCEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA