| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294587
Identifier: 197294587
GI number: 197294587
Start: 550678
End: 551286
Strand: Direct
Name: 197294587
Synonym: PAa_0543
Alternate gene names: NA
Gene position: 550678-551286 (Clockwise)
Preceding gene: 197294586
Following gene: 197294597
Centisome position: 62.58
GC content: 27.59
Gene sequence:
>609_bases GTGGGTTTAATAACTTATAACTACTTAAAAACATATGAAAATGCGAAATATTTGAAGTATAATATCCCTATTTTAAATAA GTTGACTCGCCCTACACATCAAATTGCGCCAGAAGTAGAAGCAAACAATGTTCAAAGTTTTGTATTTCTTTCATCTTTTT GTATAATGTTCTTAGCAGGTTTGTTATGGGCAATAGGTTTTTATTGGTATTTGTCTTTGTTAAAATTCACTACTATCATT TTAAGTGTAGGTTGGGGATATTTTTTCGGTGCTCAATATGCTCTCTTTCAAATGGCTTTTAATATAAAAAGTAATTATAT AGCATTATTTTTTTATATTCCTTTTTTGGGAACTCTTTTGGTTGTTGGGTTGATGTCTTATTTATATTATTCCAAAAAAC TTGTGATTACTCCTCAAAAACGTTACTTGATTGCTATTTGTTTTATTATTTTTTATTTTGTTTCTATATCACTTAATTTG TATCGACGTCCTTTTTCTTTTTGGTGGATTCATATAATTATATTGCTATGGTCTATTTTGGGACTGGTAATTAGTGCTTT TATTTGGGTTTTAATGTTAGAACAAGTGGATATTTTTGTAGAAAAATAA
Upstream 100 bases:
>100_bases ACTTAAAAATAAAAATCAATTAACAAAGACTTCTAGCAATCCTACTACTCGATTTAGTATTTTATTAAAATTTATTATTT TATCTTTCATTACTTTATTT
Downstream 100 bases:
>100_bases ATACCTAAAAAATATGAATGGTTGTTAATTGGATTAATGTTGGTGAGTTTGATCAATATTTTTATGCTTATTTTAACTAT TATGATACGAATTATTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MGLITYNYLKTYENAKYLKYNIPILNKLTRPTHQIAPEVEANNVQSFVFLSSFCIMFLAGLLWAIGFYWYLSLLKFTTII LSVGWGYFFGAQYALFQMAFNIKSNYIALFFYIPFLGTLLVVGLMSYLYYSKKLVITPQKRYLIAICFIIFYFVSISLNL YRRPFSFWWIHIIILLWSILGLVISAFIWVLMLEQVDIFVEK
Sequences:
>Translated_202_residues MGLITYNYLKTYENAKYLKYNIPILNKLTRPTHQIAPEVEANNVQSFVFLSSFCIMFLAGLLWAIGFYWYLSLLKFTTII LSVGWGYFFGAQYALFQMAFNIKSNYIALFFYIPFLGTLLVVGLMSYLYYSKKLVITPQKRYLIAICFIIFYFVSISLNL YRRPFSFWWIHIIILLWSILGLVISAFIWVLMLEQVDIFVEK >Mature_201_residues GLITYNYLKTYENAKYLKYNIPILNKLTRPTHQIAPEVEANNVQSFVFLSSFCIMFLAGLLWAIGFYWYLSLLKFTTIIL SVGWGYFFGAQYALFQMAFNIKSNYIALFFYIPFLGTLLVVGLMSYLYYSKKLVITPQKRYLIAICFIIFYFVSISLNLY RRPFSFWWIHIIILLWSILGLVISAFIWVLMLEQVDIFVEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23871; Mature: 23740
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLITYNYLKTYENAKYLKYNIPILNKLTRPTHQIAPEVEANNVQSFVFLSSFCIMFLAG CCCEEHHHHHHHCCCCEEEECCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LLWAIGFYWYLSLLKFTTIILSVGWGYFFGAQYALFQMAFNIKSNYIALFFYIPFLGTLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VVGLMSYLYYSKKLVITPQKRYLIAICFIIFYFVSISLNLYRRPFSFWWIHIIILLWSIL HHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH GLVISAFIWVLMLEQVDIFVEK HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GLITYNYLKTYENAKYLKYNIPILNKLTRPTHQIAPEVEANNVQSFVFLSSFCIMFLAG CCEEHHHHHHHCCCCEEEECCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LLWAIGFYWYLSLLKFTTIILSVGWGYFFGAQYALFQMAFNIKSNYIALFFYIPFLGTLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VVGLMSYLYYSKKLVITPQKRYLIAICFIIFYFVSISLNLYRRPFSFWWIHIIILLWSIL HHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH GLVISAFIWVLMLEQVDIFVEK HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA