| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294547
Identifier: 197294547
GI number: 197294547
Start: 497168
End: 497374
Strand: Reverse
Name: 197294547
Synonym: PAa_0502
Alternate gene names: NA
Gene position: 497374-497168 (Counterclockwise)
Preceding gene: 197294548
Following gene: 197294546
Centisome position: 56.52
GC content: 28.5
Gene sequence:
>207_bases ATGCCACAATTAGTAATTTGGATTTTAGGAATTTTAATAGGAATGGTTTTGGGAGCTTTTTTAATGTTTTATTGGTTTAA GAAATATTTGCAAAAAAATCCTCCTATTAATGAAAGACAAATCAAAGAAATGTTTCGCCAAATGGGAAGAACTCCTTCCG AAAAACAAATTCGTCAAATTATCAATAGTATGAAGCAGATTAGATAA
Upstream 100 bases:
>100_bases ACAAATAAAAGATTTTATTTTAACGAAAGAAAAAAAATATGGTAGCAAAAAGCTACAATTTTATCAAAAAAATGATGAAA ATTAAAAAAGGAGTAAAAAA
Downstream 100 bases:
>100_bases AAAAATGGATACAAAAAATATTATTTTTGTTTTAATTATCATTATTGTTATTTTTACAATAATGAACTGTTTTTATCAAA AAAACATTAAAAAGAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MPQLVIWILGILIGMVLGAFLMFYWFKKYLQKNPPINERQIKEMFRQMGRTPSEKQIRQIINSMKQIR
Sequences:
>Translated_68_residues MPQLVIWILGILIGMVLGAFLMFYWFKKYLQKNPPINERQIKEMFRQMGRTPSEKQIRQIINSMKQIR >Mature_67_residues PQLVIWILGILIGMVLGAFLMFYWFKKYLQKNPPINERQIKEMFRQMGRTPSEKQIRQIINSMKQIR
Specific function: Unknown
COG id: COG3763
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0154 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005359 - ProDom: PD048972 [H]
Pfam domain/function: PF03672 UPF0154 [H]
EC number: NA
Molecular weight: Translated: 8241; Mature: 8110
Theoretical pI: Translated: 11.38; Mature: 11.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.8 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLVIWILGILIGMVLGAFLMFYWFKKYLQKNPPINERQIKEMFRQMGRTPSEKQIRQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHH INSMKQIR HHHHHHCC >Mature Secondary Structure PQLVIWILGILIGMVLGAFLMFYWFKKYLQKNPPINERQIKEMFRQMGRTPSEKQIRQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHH INSMKQIR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA