| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is znuB [H]
Identifier: 197294529
GI number: 197294529
Start: 479443
End: 480531
Strand: Direct
Name: znuB [H]
Synonym: PAa_0484
Alternate gene names: 197294529
Gene position: 479443-480531 (Clockwise)
Preceding gene: 197294528
Following gene: 197294530
Centisome position: 54.48
GC content: 26.26
Gene sequence:
>1089_bases ATGTTAAATATAACTAATCAGTTTGATTGGGAAGTTTATGTAGTTTTAATTTTTTGCTCTTTGGCTTTATCGGTTTTAGG TGTTTTTTTGGTTTTAAAAAAAGTATCTATGATTATTGATGCTATTAGTCATAGTGTTTTGTTAGGAATTGTTTTGGCTT TTTTATTTATCAAACAACTTAATTCTCCTTTTTTAATTATTGGTGGCACTTTGATTGGCATTTTAAATTTTTATTTAGTT GAAATTGTGGGTAAAAATCCTCGGATTAAAAAAGATGCCGCCATTGGGATTGTCTTTAGTTTTTTCTTCGCTTTAGCGAT TTTAATTATTAGTGTTTTTATTCGAGATGTACATATGGACACAGATGCTGTTTTTTTAGGCAACGTTGAGTTAACTGATG TTAGTGTTTTGAAAAAAATTATTCCTATTTTATTATTAAATCTTGGTTTTATTTTTTTCTTTTATAAAGAATTAAAAATT TATATTTTTGATCCTGTTTTAGCTTCTATTTTAGGTTTTTCAACTTTTTTAATTAATTATTGTTTAATCACCTTAATTTC TGTTACAGCGGTCATTTCTTTTGATATAGTGGGTTCCGTTATGACAATTGCTTCTATTATTGGTCCTGCTGCTATTTCTC TTTTGTTAAGTAAAAAACTATTAAATTGTATTTTATTGTCTTTATGGTTTGCCTTTGTCAGCTCTAGTTTAGGTTATTAC TTAAGTATGATTACTGATTTGCCAGTGGCAGGCTTGATTTCGATGACTATTTTGACTATCTTTTTGTTGGTTCTTTTCTT GGAACCCAAAAACGGAATTGTTGCAAAAATGTTTTATAATCGTTTACAAAAAAAATCTTTTATGGTAATATCTTTTTTGA TGCATTTAAGCAAGAACGAAAAACATCAAAAAGAAAATCAAATTTTAAAATTAAAAGAAGAACTTCAATGGTCTTTGACT TCTTATAACAAATGTGTTGATCAAGCTTTAAAATTAGGTTATATCGTTATCAAAAAAAACCAAGTTTTTTTAAAAGATTT AGGTAAACAAATTTTATCCCAAAAGATATCTTTATGGAAATTAGAATAA
Upstream 100 bases:
>100_bases AGTTCTTTTGTTGGCGCCTAAATATGGTTTTATTTCTAGAAAAATATTTAATTCAAAAAAAGAAAAAGTTTTTAAATTTA ATTAATGGTTAGGTACAAAA
Downstream 100 bases:
>100_bases AAACTCGATTTCTGTAAATACTTTTTTTTTATTATACTTAAGATGAAAATATATTTTATGGCCTTTTTCTTCTTTTAATG AAATCAATAAGTAAAATCAA
Product: ABC-type Zn/Mn transport system,permease component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MLNITNQFDWEVYVVLIFCSLALSVLGVFLVLKKVSMIIDAISHSVLLGIVLAFLFIKQLNSPFLIIGGTLIGILNFYLV EIVGKNPRIKKDAAIGIVFSFFFALAILIISVFIRDVHMDTDAVFLGNVELTDVSVLKKIIPILLLNLGFIFFFYKELKI YIFDPVLASILGFSTFLINYCLITLISVTAVISFDIVGSVMTIASIIGPAAISLLLSKKLLNCILLSLWFAFVSSSLGYY LSMITDLPVAGLISMTILTIFLLVLFLEPKNGIVAKMFYNRLQKKSFMVISFLMHLSKNEKHQKENQILKLKEELQWSLT SYNKCVDQALKLGYIVIKKNQVFLKDLGKQILSQKISLWKLE
Sequences:
>Translated_362_residues MLNITNQFDWEVYVVLIFCSLALSVLGVFLVLKKVSMIIDAISHSVLLGIVLAFLFIKQLNSPFLIIGGTLIGILNFYLV EIVGKNPRIKKDAAIGIVFSFFFALAILIISVFIRDVHMDTDAVFLGNVELTDVSVLKKIIPILLLNLGFIFFFYKELKI YIFDPVLASILGFSTFLINYCLITLISVTAVISFDIVGSVMTIASIIGPAAISLLLSKKLLNCILLSLWFAFVSSSLGYY LSMITDLPVAGLISMTILTIFLLVLFLEPKNGIVAKMFYNRLQKKSFMVISFLMHLSKNEKHQKENQILKLKEELQWSLT SYNKCVDQALKLGYIVIKKNQVFLKDLGKQILSQKISLWKLE >Mature_362_residues MLNITNQFDWEVYVVLIFCSLALSVLGVFLVLKKVSMIIDAISHSVLLGIVLAFLFIKQLNSPFLIIGGTLIGILNFYLV EIVGKNPRIKKDAAIGIVFSFFFALAILIISVFIRDVHMDTDAVFLGNVELTDVSVLKKIIPILLLNLGFIFFFYKELKI YIFDPVLASILGFSTFLINYCLITLISVTAVISFDIVGSVMTIASIIGPAAISLLLSKKLLNCILLSLWFAFVSSSLGYY LSMITDLPVAGLISMTILTIFLLVLFLEPKNGIVAKMFYNRLQKKSFMVISFLMHLSKNEKHQKENQILKLKEELQWSLT SYNKCVDQALKLGYIVIKKNQVFLKDLGKQILSQKISLWKLE
Specific function: Part of an ATP-driven transport system troABCD for zinc [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 40747; Mature: 40747
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNITNQFDWEVYVVLIFCSLALSVLGVFLVLKKVSMIIDAISHSVLLGIVLAFLFIKQL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NSPFLIIGGTLIGILNFYLVEIVGKNPRIKKDAAIGIVFSFFFALAILIISVFIRDVHMD CCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TDAVFLGNVELTDVSVLKKIIPILLLNLGFIFFFYKELKIYIFDPVLASILGFSTFLINY CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH CLITLISVTAVISFDIVGSVMTIASIIGPAAISLLLSKKLLNCILLSLWFAFVSSSLGYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSMITDLPVAGLISMTILTIFLLVLFLEPKNGIVAKMFYNRLQKKSFMVISFLMHLSKNE HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH KHQKENQILKLKEELQWSLTSYNKCVDQALKLGYIVIKKNQVFLKDLGKQILSQKISLWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHCCHHHHC LE CC >Mature Secondary Structure MLNITNQFDWEVYVVLIFCSLALSVLGVFLVLKKVSMIIDAISHSVLLGIVLAFLFIKQL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NSPFLIIGGTLIGILNFYLVEIVGKNPRIKKDAAIGIVFSFFFALAILIISVFIRDVHMD CCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TDAVFLGNVELTDVSVLKKIIPILLLNLGFIFFFYKELKIYIFDPVLASILGFSTFLINY CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH CLITLISVTAVISFDIVGSVMTIASIIGPAAISLLLSKKLLNCILLSLWFAFVSSSLGYY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSMITDLPVAGLISMTILTIFLLVLFLEPKNGIVAKMFYNRLQKKSFMVISFLMHLSKNE HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH KHQKENQILKLKEELQWSLTSYNKCVDQALKLGYIVIKKNQVFLKDLGKQILSQKISLWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHCCHHHHC LE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9332349; 9665876 [H]